Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS15905

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS15900 and SGL_RS15905 are separated by 52 nucleotidesSGL_RS15905 and SGL_RS15910 are separated by 46 nucleotides SGL_RS15900: SGL_RS15900 - arsenosugar biosynthesis arsenite methyltransferase ArsM, at 3,017,183 to 3,018,151 _RS15900 SGL_RS15905: SGL_RS15905 - arsenosugar biosynthesis radical SAM protein ArsS, at 3,018,204 to 3,019,214 _RS15905 SGL_RS15910: SGL_RS15910 - TVP38/TMEM64 family protein, at 3,019,261 to 3,019,890 _RS15910 Position (kb) 3018 3019 3020Strain fitness (log2 ratio) -1 0 1at 3017.250 kb on + strandat 3017.255 kb on + strandat 3017.263 kb on - strandat 3017.268 kb on + strandat 3017.326 kb on + strand, within SGL_RS15900at 3017.370 kb on - strand, within SGL_RS15900at 3017.401 kb on - strand, within SGL_RS15900at 3017.439 kb on - strand, within SGL_RS15900at 3017.439 kb on - strand, within SGL_RS15900at 3017.712 kb on - strand, within SGL_RS15900at 3017.712 kb on - strand, within SGL_RS15900at 3017.784 kb on + strand, within SGL_RS15900at 3019.036 kb on - strand, within SGL_RS15905at 3019.073 kb on + strand, within SGL_RS15905at 3019.292 kb on + strandat 3019.335 kb on + strand, within SGL_RS15910at 3019.362 kb on - strand, within SGL_RS15910at 3019.406 kb on + strand, within SGL_RS15910at 3019.406 kb on + strand, within SGL_RS15910at 3019.416 kb on - strand, within SGL_RS15910

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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3,017,250 + -0.2
3,017,255 + -0.1
3,017,263 - +0.3
3,017,268 + -0.0
3,017,326 + SGL_RS15900 0.15 -0.0
3,017,370 - SGL_RS15900 0.19 +0.1
3,017,401 - SGL_RS15900 0.22 -0.3
3,017,439 - SGL_RS15900 0.26 -0.5
3,017,439 - SGL_RS15900 0.26 +0.3
3,017,712 - SGL_RS15900 0.55 -0.3
3,017,712 - SGL_RS15900 0.55 -0.0
3,017,784 + SGL_RS15900 0.62 +0.1
3,019,036 - SGL_RS15905 0.82 +0.2
3,019,073 + SGL_RS15905 0.86 +0.4
3,019,292 + -0.2
3,019,335 + SGL_RS15910 0.12 -0.2
3,019,362 - SGL_RS15910 0.16 -0.2
3,019,406 + SGL_RS15910 0.23 -0.4
3,019,406 + SGL_RS15910 0.23 +0.1
3,019,416 - SGL_RS15910 0.25 +0.5

Or see this region's nucleotide sequence