Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS15600 and SGL_RS15605 are separated by 287 nucleotides SGL_RS15605 and SGL_RS15610 are separated by 755 nucleotides
SGL_RS15600: SGL_RS15600 - MFS transporter, at 2,948,563 to 2,949,819
_RS15600
SGL_RS15605: SGL_RS15605 - hypothetical protein, at 2,950,107 to 2,950,343
_RS15605
SGL_RS15610: SGL_RS15610 - chloride channel protein, at 2,951,099 to 2,952,454
_RS15610
Position (kb)
2950
2951 Strain fitness (log2 ratio)
-1
0
1 at 2949.194 kb on - strand, within SGL_RS15600 at 2949.231 kb on + strand, within SGL_RS15600 at 2949.231 kb on + strand, within SGL_RS15600 at 2949.244 kb on - strand, within SGL_RS15600 at 2949.277 kb on - strand, within SGL_RS15600 at 2949.300 kb on - strand, within SGL_RS15600 at 2949.301 kb on - strand, within SGL_RS15600 at 2949.302 kb on + strand, within SGL_RS15600 at 2949.320 kb on + strand, within SGL_RS15600 at 2949.326 kb on + strand, within SGL_RS15600 at 2949.326 kb on + strand, within SGL_RS15600 at 2949.326 kb on + strand, within SGL_RS15600 at 2949.326 kb on + strand, within SGL_RS15600 at 2949.328 kb on - strand, within SGL_RS15600 at 2949.334 kb on - strand, within SGL_RS15600 at 2949.359 kb on + strand, within SGL_RS15600 at 2949.384 kb on + strand, within SGL_RS15600 at 2949.463 kb on - strand, within SGL_RS15600 at 2949.514 kb on + strand, within SGL_RS15600 at 2949.568 kb on - strand, within SGL_RS15600 at 2949.595 kb on + strand, within SGL_RS15600 at 2949.646 kb on - strand, within SGL_RS15600 at 2949.697 kb on + strand at 2949.710 kb on - strand at 2949.724 kb on + strand at 2949.742 kb on + strand at 2949.802 kb on + strand at 2949.808 kb on - strand at 2950.035 kb on + strand at 2950.048 kb on + strand at 2950.101 kb on + strand at 2950.162 kb on + strand, within SGL_RS15605 at 2950.390 kb on - strand at 2950.390 kb on - strand at 2950.437 kb on + strand at 2950.881 kb on - strand at 2951.123 kb on + strand at 2951.142 kb on - strand at 2951.156 kb on - strand at 2951.290 kb on - strand, within SGL_RS15610 at 2951.292 kb on + strand, within SGL_RS15610 at 2951.307 kb on + strand, within SGL_RS15610 at 2951.311 kb on + strand, within SGL_RS15610 at 2951.311 kb on + strand, within SGL_RS15610 at 2951.325 kb on - strand, within SGL_RS15610 at 2951.325 kb on - strand, within SGL_RS15610 at 2951.325 kb on - strand, within SGL_RS15610 at 2951.334 kb on + strand, within SGL_RS15610
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,949,194 - SGL_RS15600 0.50 -0.2 2,949,231 + SGL_RS15600 0.53 +0.2 2,949,231 + SGL_RS15600 0.53 +0.5 2,949,244 - SGL_RS15600 0.54 -0.1 2,949,277 - SGL_RS15600 0.57 -0.5 2,949,300 - SGL_RS15600 0.59 +0.4 2,949,301 - SGL_RS15600 0.59 -0.3 2,949,302 + SGL_RS15600 0.59 +0.1 2,949,320 + SGL_RS15600 0.60 +0.2 2,949,326 + SGL_RS15600 0.61 +0.1 2,949,326 + SGL_RS15600 0.61 -0.1 2,949,326 + SGL_RS15600 0.61 -0.4 2,949,326 + SGL_RS15600 0.61 -0.0 2,949,328 - SGL_RS15600 0.61 -0.1 2,949,334 - SGL_RS15600 0.61 +0.0 2,949,359 + SGL_RS15600 0.63 +0.0 2,949,384 + SGL_RS15600 0.65 +0.0 2,949,463 - SGL_RS15600 0.72 +0.2 2,949,514 + SGL_RS15600 0.76 +0.4 2,949,568 - SGL_RS15600 0.80 -0.0 2,949,595 + SGL_RS15600 0.82 -0.1 2,949,646 - SGL_RS15600 0.86 -0.8 2,949,697 + +0.1 2,949,710 - +0.5 2,949,724 + -0.3 2,949,742 + +0.0 2,949,802 + -0.2 2,949,808 - -0.6 2,950,035 + -0.3 2,950,048 + +0.4 2,950,101 + +0.1 2,950,162 + SGL_RS15605 0.23 +0.4 2,950,390 - -0.4 2,950,390 - -0.2 2,950,437 + -0.6 2,950,881 - +0.2 2,951,123 + -0.1 2,951,142 - -0.0 2,951,156 - -0.1 2,951,290 - SGL_RS15610 0.14 +0.1 2,951,292 + SGL_RS15610 0.14 -0.1 2,951,307 + SGL_RS15610 0.15 +0.2 2,951,311 + SGL_RS15610 0.16 -0.5 2,951,311 + SGL_RS15610 0.16 -0.2 2,951,325 - SGL_RS15610 0.17 +0.3 2,951,325 - SGL_RS15610 0.17 +0.3 2,951,325 - SGL_RS15610 0.17 -0.2 2,951,334 + SGL_RS15610 0.17 -0.2
Or see this region's nucleotide sequence