Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS15235 and SGL_RS15240 are separated by 229 nucleotides SGL_RS15240 and SGL_RS15245 overlap by 4 nucleotides SGL_RS15245 and SGL_RS15250 are separated by 255 nucleotides
SGL_RS15235: SGL_RS15235 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG, at 2,868,767 to 2,869,561
_RS15235
SGL_RS15240: SGL_RS15240 - Hpt domain-containing protein, at 2,869,791 to 2,870,699
_RS15240
SGL_RS15245: SGL_RS15245 - iron-sulfur cluster biosynthesis transcriptional regulator SufR, at 2,870,696 to 2,871,418
_RS15245
SGL_RS15250: SGL_RS15250 - Fe-S cluster assembly protein SufB, at 2,871,674 to 2,873,116
_RS15250
Position (kb)
2869
2870
2871 Strain fitness (log2 ratio)
-1
0
1 at 2868.889 kb on + strand, within SGL_RS15235 at 2868.910 kb on + strand, within SGL_RS15235 at 2869.119 kb on + strand, within SGL_RS15235 at 2869.158 kb on + strand, within SGL_RS15235 at 2869.279 kb on + strand, within SGL_RS15235 at 2869.304 kb on + strand, within SGL_RS15235 at 2869.335 kb on - strand, within SGL_RS15235 at 2869.348 kb on - strand, within SGL_RS15235 at 2869.393 kb on + strand, within SGL_RS15235 at 2869.393 kb on + strand, within SGL_RS15235 at 2869.403 kb on + strand, within SGL_RS15235 at 2869.437 kb on + strand, within SGL_RS15235 at 2869.531 kb on - strand at 2869.537 kb on - strand at 2869.670 kb on + strand at 2869.761 kb on - strand at 2869.761 kb on - strand at 2869.857 kb on - strand at 2869.874 kb on + strand at 2869.874 kb on + strand at 2869.874 kb on + strand at 2869.881 kb on + strand at 2870.254 kb on + strand, within SGL_RS15240 at 2870.297 kb on + strand, within SGL_RS15240 at 2870.426 kb on - strand, within SGL_RS15240 at 2870.550 kb on - strand, within SGL_RS15240 at 2871.170 kb on - strand, within SGL_RS15245 at 2871.254 kb on + strand, within SGL_RS15245 at 2871.328 kb on + strand, within SGL_RS15245 at 2871.333 kb on + strand, within SGL_RS15245 at 2871.468 kb on + strand at 2871.474 kb on + strand at 2871.476 kb on - strand at 2871.476 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,868,889 + SGL_RS15235 0.15 -0.2 2,868,910 + SGL_RS15235 0.18 -0.5 2,869,119 + SGL_RS15235 0.44 -0.2 2,869,158 + SGL_RS15235 0.49 +0.0 2,869,279 + SGL_RS15235 0.64 -0.1 2,869,304 + SGL_RS15235 0.68 -0.0 2,869,335 - SGL_RS15235 0.71 +0.4 2,869,348 - SGL_RS15235 0.73 +0.3 2,869,393 + SGL_RS15235 0.79 -0.2 2,869,393 + SGL_RS15235 0.79 -0.4 2,869,403 + SGL_RS15235 0.80 -0.3 2,869,437 + SGL_RS15235 0.84 +0.0 2,869,531 - -0.1 2,869,537 - +0.7 2,869,670 + +0.2 2,869,761 - -0.9 2,869,761 - -0.2 2,869,857 - -0.4 2,869,874 + +0.1 2,869,874 + -0.0 2,869,874 + -0.0 2,869,881 + -0.1 2,870,254 + SGL_RS15240 0.51 +0.4 2,870,297 + SGL_RS15240 0.56 -0.0 2,870,426 - SGL_RS15240 0.70 +1.4 2,870,550 - SGL_RS15240 0.83 +0.1 2,871,170 - SGL_RS15245 0.66 -0.6 2,871,254 + SGL_RS15245 0.77 -0.5 2,871,328 + SGL_RS15245 0.87 -0.4 2,871,333 + SGL_RS15245 0.88 -0.9 2,871,468 + -0.2 2,871,474 + -0.5 2,871,476 - -0.7 2,871,476 - -0.0
Or see this region's nucleotide sequence