Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14750 and SGL_RS14755 are separated by 84 nucleotides SGL_RS14755 and SGL_RS14760 are separated by 216 nucleotides SGL_RS14760 and SGL_RS14765 are separated by 133 nucleotides
SGL_RS14750: SGL_RS14750 - TldD/PmbA family protein, at 2,760,689 to 2,762,029
_RS14750
SGL_RS14755: SGL_RS14755 - tetratricopeptide repeat protein, at 2,762,114 to 2,762,953
_RS14755
SGL_RS14760: SGL_RS14760 - TetR/AcrR family transcriptional regulator, at 2,763,170 to 2,763,733
_RS14760
SGL_RS14765: SGL_RS14765 - MATE family efflux transporter, at 2,763,867 to 2,765,252
_RS14765
Position (kb)
2762
2763 Strain fitness (log2 ratio)
-1
0
1 at 2761.164 kb on + strand, within SGL_RS14750 at 2761.178 kb on + strand, within SGL_RS14750 at 2761.183 kb on + strand, within SGL_RS14750 at 2761.205 kb on - strand, within SGL_RS14750 at 2761.210 kb on - strand, within SGL_RS14750 at 2761.558 kb on - strand, within SGL_RS14750 at 2761.612 kb on + strand, within SGL_RS14750 at 2761.644 kb on - strand, within SGL_RS14750 at 2761.699 kb on - strand, within SGL_RS14750 at 2761.867 kb on + strand, within SGL_RS14750 at 2761.867 kb on + strand, within SGL_RS14750 at 2761.867 kb on + strand, within SGL_RS14750 at 2761.877 kb on + strand, within SGL_RS14750 at 2761.916 kb on + strand at 2761.986 kb on - strand at 2762.022 kb on - strand at 2762.050 kb on + strand at 2762.087 kb on - strand at 2762.087 kb on - strand at 2762.235 kb on - strand, within SGL_RS14755 at 2762.267 kb on + strand, within SGL_RS14755 at 2762.284 kb on - strand, within SGL_RS14755 at 2762.341 kb on - strand, within SGL_RS14755 at 2762.341 kb on - strand, within SGL_RS14755 at 2762.343 kb on + strand, within SGL_RS14755 at 2762.382 kb on + strand, within SGL_RS14755 at 2762.382 kb on + strand, within SGL_RS14755 at 2762.382 kb on + strand, within SGL_RS14755 at 2762.382 kb on + strand, within SGL_RS14755 at 2762.387 kb on + strand, within SGL_RS14755 at 2762.475 kb on + strand, within SGL_RS14755 at 2762.550 kb on + strand, within SGL_RS14755 at 2762.728 kb on - strand, within SGL_RS14755 at 2762.813 kb on + strand, within SGL_RS14755 at 2762.843 kb on - strand, within SGL_RS14755 at 2762.856 kb on - strand, within SGL_RS14755 at 2762.985 kb on - strand at 2763.047 kb on - strand at 2763.165 kb on + strand at 2763.198 kb on + strand at 2763.257 kb on - strand, within SGL_RS14760 at 2763.271 kb on - strand, within SGL_RS14760 at 2763.357 kb on + strand, within SGL_RS14760 at 2763.359 kb on + strand, within SGL_RS14760 at 2763.376 kb on - strand, within SGL_RS14760 at 2763.376 kb on - strand, within SGL_RS14760 at 2763.376 kb on - strand, within SGL_RS14760 at 2763.429 kb on + strand, within SGL_RS14760 at 2763.436 kb on + strand, within SGL_RS14760 at 2763.437 kb on - strand, within SGL_RS14760 at 2763.442 kb on - strand, within SGL_RS14760 at 2763.629 kb on + strand, within SGL_RS14760 at 2763.637 kb on - strand, within SGL_RS14760 at 2763.639 kb on + strand, within SGL_RS14760 at 2763.647 kb on - strand, within SGL_RS14760 at 2763.647 kb on - strand, within SGL_RS14760 at 2763.653 kb on - strand, within SGL_RS14760 at 2763.663 kb on + strand, within SGL_RS14760 at 2763.671 kb on - strand, within SGL_RS14760 at 2763.690 kb on + strand at 2763.698 kb on + strand at 2763.715 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,761,164 + SGL_RS14750 0.35 -0.4 2,761,178 + SGL_RS14750 0.36 +0.1 2,761,183 + SGL_RS14750 0.37 +0.3 2,761,205 - SGL_RS14750 0.38 +0.1 2,761,210 - SGL_RS14750 0.39 +0.1 2,761,558 - SGL_RS14750 0.65 +0.3 2,761,612 + SGL_RS14750 0.69 -0.1 2,761,644 - SGL_RS14750 0.71 +0.1 2,761,699 - SGL_RS14750 0.75 -0.1 2,761,867 + SGL_RS14750 0.88 +0.4 2,761,867 + SGL_RS14750 0.88 +0.1 2,761,867 + SGL_RS14750 0.88 +0.1 2,761,877 + SGL_RS14750 0.89 -0.3 2,761,916 + -0.1 2,761,986 - +0.0 2,762,022 - +0.4 2,762,050 + +0.1 2,762,087 - +0.6 2,762,087 - -0.9 2,762,235 - SGL_RS14755 0.14 +0.0 2,762,267 + SGL_RS14755 0.18 +0.1 2,762,284 - SGL_RS14755 0.20 -0.2 2,762,341 - SGL_RS14755 0.27 +0.9 2,762,341 - SGL_RS14755 0.27 +0.1 2,762,343 + SGL_RS14755 0.27 +0.2 2,762,382 + SGL_RS14755 0.32 +0.7 2,762,382 + SGL_RS14755 0.32 -0.3 2,762,382 + SGL_RS14755 0.32 +0.2 2,762,382 + SGL_RS14755 0.32 +1.1 2,762,387 + SGL_RS14755 0.33 +0.3 2,762,475 + SGL_RS14755 0.43 +0.1 2,762,550 + SGL_RS14755 0.52 +1.3 2,762,728 - SGL_RS14755 0.73 -0.0 2,762,813 + SGL_RS14755 0.83 -0.1 2,762,843 - SGL_RS14755 0.87 -0.3 2,762,856 - SGL_RS14755 0.88 +0.1 2,762,985 - +0.7 2,763,047 - +0.1 2,763,165 + +0.3 2,763,198 + +0.6 2,763,257 - SGL_RS14760 0.15 +0.2 2,763,271 - SGL_RS14760 0.18 -0.0 2,763,357 + SGL_RS14760 0.33 +0.2 2,763,359 + SGL_RS14760 0.34 -0.2 2,763,376 - SGL_RS14760 0.37 -0.0 2,763,376 - SGL_RS14760 0.37 +0.2 2,763,376 - SGL_RS14760 0.37 +0.2 2,763,429 + SGL_RS14760 0.46 -0.3 2,763,436 + SGL_RS14760 0.47 +0.5 2,763,437 - SGL_RS14760 0.47 +0.3 2,763,442 - SGL_RS14760 0.48 -0.1 2,763,629 + SGL_RS14760 0.81 +0.2 2,763,637 - SGL_RS14760 0.83 +0.1 2,763,639 + SGL_RS14760 0.83 +0.2 2,763,647 - SGL_RS14760 0.85 +0.1 2,763,647 - SGL_RS14760 0.85 -0.1 2,763,653 - SGL_RS14760 0.86 +0.0 2,763,663 + SGL_RS14760 0.87 -0.5 2,763,671 - SGL_RS14760 0.89 +0.1 2,763,690 + +0.1 2,763,698 + -0.1 2,763,715 + -0.2
Or see this region's nucleotide sequence