Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS13980 and SGL_RS13985 are separated by 117 nucleotides SGL_RS13985 and SGL_RS13990 are separated by 37 nucleotides SGL_RS13990 and SGL_RS13995 are separated by 213 nucleotides
SGL_RS13980: SGL_RS13980 - acetyl-CoA carboxylase biotin carboxylase subunit, at 2,597,851 to 2,599,197
_RS13980
SGL_RS13985: SGL_RS13985 - hypothetical protein, at 2,599,315 to 2,599,974
_RS13985
SGL_RS13990: SGL_RS13990 - nucleoside deaminase, at 2,600,012 to 2,600,491
_RS13990
SGL_RS13995: SGL_RS13995 - methionyl-tRNA formyltransferase, at 2,600,705 to 2,601,697
_RS13995
Position (kb)
2599
2600 Strain fitness (log2 ratio)
-1
0
1 at 2599.311 kb on + strand at 2599.331 kb on + strand at 2599.331 kb on + strand at 2599.338 kb on - strand at 2599.646 kb on - strand, within SGL_RS13985 at 2599.749 kb on - strand, within SGL_RS13985 at 2599.834 kb on + strand, within SGL_RS13985 at 2599.834 kb on + strand, within SGL_RS13985 at 2599.870 kb on - strand, within SGL_RS13985 at 2600.163 kb on - strand, within SGL_RS13990 at 2600.196 kb on + strand, within SGL_RS13990 at 2600.247 kb on + strand, within SGL_RS13990 at 2600.257 kb on - strand, within SGL_RS13990 at 2600.307 kb on + strand, within SGL_RS13990 at 2600.307 kb on + strand, within SGL_RS13990 at 2600.315 kb on - strand, within SGL_RS13990 at 2600.354 kb on + strand, within SGL_RS13990 at 2600.362 kb on - strand, within SGL_RS13990 at 2600.362 kb on - strand, within SGL_RS13990 at 2600.362 kb on - strand, within SGL_RS13990 at 2600.415 kb on + strand, within SGL_RS13990 at 2600.482 kb on - strand at 2600.496 kb on - strand at 2600.691 kb on - strand at 2600.828 kb on - strand, within SGL_RS13995
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,599,311 + +0.8 2,599,331 + +0.2 2,599,331 + +0.2 2,599,338 - -0.1 2,599,646 - SGL_RS13985 0.50 -0.0 2,599,749 - SGL_RS13985 0.66 -0.1 2,599,834 + SGL_RS13985 0.79 +1.6 2,599,834 + SGL_RS13985 0.79 -0.1 2,599,870 - SGL_RS13985 0.84 +0.4 2,600,163 - SGL_RS13990 0.31 -0.3 2,600,196 + SGL_RS13990 0.38 +0.1 2,600,247 + SGL_RS13990 0.49 +0.2 2,600,257 - SGL_RS13990 0.51 +0.5 2,600,307 + SGL_RS13990 0.61 -0.2 2,600,307 + SGL_RS13990 0.61 +0.4 2,600,315 - SGL_RS13990 0.63 +0.1 2,600,354 + SGL_RS13990 0.71 +0.1 2,600,362 - SGL_RS13990 0.73 +0.2 2,600,362 - SGL_RS13990 0.73 -0.6 2,600,362 - SGL_RS13990 0.73 -0.0 2,600,415 + SGL_RS13990 0.84 -0.0 2,600,482 - +0.2 2,600,496 - +0.4 2,600,691 - +0.0 2,600,828 - SGL_RS13995 0.12 +0.6
Or see this region's nucleotide sequence