Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11695 and SGL_RS11700 are separated by 143 nucleotides SGL_RS11700 and SGL_RS11705 are separated by 226 nucleotides SGL_RS11705 and SGL_RS18930 are separated by 111 nucleotides
SGL_RS11695: SGL_RS11695 - hypothetical protein, at 2,080,885 to 2,082,720
_RS11695
SGL_RS11700: SGL_RS11700 - 2OG-Fe(II) oxygenase, at 2,082,864 to 2,083,916
_RS11700
SGL_RS11705: SGL_RS11705 - DUF2281 domain-containing protein, at 2,084,143 to 2,084,370
_RS11705
SGL_RS18930: SGL_RS18930 - PIN domain-containing protein, at 2,084,482 to 2,084,760
_RS18930
Position (kb)
2082
2083
2084 Strain fitness (log2 ratio)
-1
0
1 at 2081.997 kb on + strand, within SGL_RS11695 at 2082.509 kb on + strand, within SGL_RS11695 at 2082.533 kb on + strand, within SGL_RS11695 at 2082.535 kb on - strand, within SGL_RS11695 at 2082.545 kb on + strand at 2082.613 kb on - strand at 2083.075 kb on + strand, within SGL_RS11700 at 2083.477 kb on + strand, within SGL_RS11700 at 2083.934 kb on + strand at 2084.038 kb on + strand at 2084.070 kb on + strand at 2084.073 kb on - strand at 2084.719 kb on + strand, within SGL_RS18930
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,081,997 + SGL_RS11695 0.61 -0.0 2,082,509 + SGL_RS11695 0.88 +0.1 2,082,533 + SGL_RS11695 0.90 +0.3 2,082,535 - SGL_RS11695 0.90 -0.2 2,082,545 + +0.1 2,082,613 - -0.2 2,083,075 + SGL_RS11700 0.20 +0.3 2,083,477 + SGL_RS11700 0.58 +0.3 2,083,934 + -0.1 2,084,038 + +0.1 2,084,070 + +0.0 2,084,073 - -0.2 2,084,719 + SGL_RS18930 0.85 +0.2
Or see this region's nucleotide sequence