Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS08660 and SGL_RS08665 are separated by 32 nucleotides SGL_RS08665 and SGL_RS08670 overlap by 25 nucleotides
SGL_RS08660: SGL_RS08660 - cyanophycin synthetase, at 1,448,060 to 1,450,681
_RS08660
SGL_RS08665: SGL_RS08665 - DUF4129 domain-containing protein, at 1,450,714 to 1,451,343
_RS08665
SGL_RS08670: SGL_RS08670 - glutathione S-transferase family protein, at 1,451,319 to 1,452,518
_RS08670
Position (kb)
1450
1451
1452 Strain fitness (log2 ratio)
-1
0
1 at 1449.733 kb on - strand, within SGL_RS08660 at 1449.801 kb on + strand, within SGL_RS08660 at 1449.878 kb on - strand, within SGL_RS08660 at 1449.889 kb on + strand, within SGL_RS08660 at 1450.006 kb on - strand, within SGL_RS08660 at 1450.069 kb on + strand, within SGL_RS08660 at 1450.069 kb on + strand, within SGL_RS08660 at 1450.120 kb on - strand, within SGL_RS08660 at 1450.360 kb on - strand, within SGL_RS08660 at 1450.548 kb on - strand at 1450.761 kb on - strand at 1450.859 kb on + strand, within SGL_RS08665 at 1450.978 kb on - strand, within SGL_RS08665 at 1451.228 kb on + strand, within SGL_RS08665 at 1451.248 kb on + strand, within SGL_RS08665 at 1451.278 kb on - strand, within SGL_RS08665 at 1451.337 kb on + strand at 1451.467 kb on - strand, within SGL_RS08670 at 1451.488 kb on + strand, within SGL_RS08670 at 1451.492 kb on + strand, within SGL_RS08670 at 1451.618 kb on + strand, within SGL_RS08670 at 1451.642 kb on + strand, within SGL_RS08670 at 1451.724 kb on + strand, within SGL_RS08670 at 1451.739 kb on - strand, within SGL_RS08670 at 1451.834 kb on - strand, within SGL_RS08670 at 1451.842 kb on - strand, within SGL_RS08670 at 1452.038 kb on + strand, within SGL_RS08670
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,449,733 - SGL_RS08660 0.64 +0.1 1,449,801 + SGL_RS08660 0.66 -0.2 1,449,878 - SGL_RS08660 0.69 -0.2 1,449,889 + SGL_RS08660 0.70 -0.1 1,450,006 - SGL_RS08660 0.74 +0.0 1,450,069 + SGL_RS08660 0.77 +0.5 1,450,069 + SGL_RS08660 0.77 -0.6 1,450,120 - SGL_RS08660 0.79 +0.2 1,450,360 - SGL_RS08660 0.88 -0.1 1,450,548 - +0.0 1,450,761 - +0.0 1,450,859 + SGL_RS08665 0.23 -0.1 1,450,978 - SGL_RS08665 0.42 +0.3 1,451,228 + SGL_RS08665 0.82 +0.6 1,451,248 + SGL_RS08665 0.85 +0.3 1,451,278 - SGL_RS08665 0.90 +0.4 1,451,337 + -0.2 1,451,467 - SGL_RS08670 0.12 +0.2 1,451,488 + SGL_RS08670 0.14 -0.2 1,451,492 + SGL_RS08670 0.14 -0.2 1,451,618 + SGL_RS08670 0.25 -0.2 1,451,642 + SGL_RS08670 0.27 +0.1 1,451,724 + SGL_RS08670 0.34 -0.0 1,451,739 - SGL_RS08670 0.35 +0.1 1,451,834 - SGL_RS08670 0.43 +0.4 1,451,842 - SGL_RS08670 0.44 -0.3 1,452,038 + SGL_RS08670 0.60 +0.1
Or see this region's nucleotide sequence