Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS08665

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS08660 and SGL_RS08665 are separated by 32 nucleotidesSGL_RS08665 and SGL_RS08670 overlap by 25 nucleotides SGL_RS08660: SGL_RS08660 - cyanophycin synthetase, at 1,448,060 to 1,450,681 _RS08660 SGL_RS08665: SGL_RS08665 - DUF4129 domain-containing protein, at 1,450,714 to 1,451,343 _RS08665 SGL_RS08670: SGL_RS08670 - glutathione S-transferase family protein, at 1,451,319 to 1,452,518 _RS08670 Position (kb) 1450 1451 1452Strain fitness (log2 ratio) -1 0 1at 1449.733 kb on - strand, within SGL_RS08660at 1449.801 kb on + strand, within SGL_RS08660at 1449.878 kb on - strand, within SGL_RS08660at 1449.889 kb on + strand, within SGL_RS08660at 1450.006 kb on - strand, within SGL_RS08660at 1450.069 kb on + strand, within SGL_RS08660at 1450.069 kb on + strand, within SGL_RS08660at 1450.120 kb on - strand, within SGL_RS08660at 1450.360 kb on - strand, within SGL_RS08660at 1450.548 kb on - strandat 1450.761 kb on - strandat 1450.859 kb on + strand, within SGL_RS08665at 1450.978 kb on - strand, within SGL_RS08665at 1451.228 kb on + strand, within SGL_RS08665at 1451.248 kb on + strand, within SGL_RS08665at 1451.278 kb on - strand, within SGL_RS08665at 1451.337 kb on + strandat 1451.467 kb on - strand, within SGL_RS08670at 1451.488 kb on + strand, within SGL_RS08670at 1451.492 kb on + strand, within SGL_RS08670at 1451.618 kb on + strand, within SGL_RS08670at 1451.642 kb on + strand, within SGL_RS08670at 1451.724 kb on + strand, within SGL_RS08670at 1451.739 kb on - strand, within SGL_RS08670at 1451.834 kb on - strand, within SGL_RS08670at 1451.842 kb on - strand, within SGL_RS08670at 1452.038 kb on + strand, within SGL_RS08670

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,449,733 - SGL_RS08660 0.64 +0.1
1,449,801 + SGL_RS08660 0.66 -0.2
1,449,878 - SGL_RS08660 0.69 -0.2
1,449,889 + SGL_RS08660 0.70 -0.1
1,450,006 - SGL_RS08660 0.74 +0.0
1,450,069 + SGL_RS08660 0.77 +0.5
1,450,069 + SGL_RS08660 0.77 -0.6
1,450,120 - SGL_RS08660 0.79 +0.2
1,450,360 - SGL_RS08660 0.88 -0.1
1,450,548 - +0.0
1,450,761 - +0.0
1,450,859 + SGL_RS08665 0.23 -0.1
1,450,978 - SGL_RS08665 0.42 +0.3
1,451,228 + SGL_RS08665 0.82 +0.6
1,451,248 + SGL_RS08665 0.85 +0.3
1,451,278 - SGL_RS08665 0.90 +0.4
1,451,337 + -0.2
1,451,467 - SGL_RS08670 0.12 +0.2
1,451,488 + SGL_RS08670 0.14 -0.2
1,451,492 + SGL_RS08670 0.14 -0.2
1,451,618 + SGL_RS08670 0.25 -0.2
1,451,642 + SGL_RS08670 0.27 +0.1
1,451,724 + SGL_RS08670 0.34 -0.0
1,451,739 - SGL_RS08670 0.35 +0.1
1,451,834 - SGL_RS08670 0.43 +0.4
1,451,842 - SGL_RS08670 0.44 -0.3
1,452,038 + SGL_RS08670 0.60 +0.1

Or see this region's nucleotide sequence