Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS07970 and SGL_RS07975 are separated by 14 nucleotides SGL_RS07975 and SGL_RS07980 are separated by 514 nucleotides
SGL_RS07970: SGL_RS07970 - pentapeptide repeat-containing protein, at 1,300,661 to 1,301,656
_RS07970
SGL_RS07975: SGL_RS07975 - RNA polymerase sigma factor, RpoD/SigA family, at 1,301,671 to 1,302,780
_RS07975
SGL_RS07980: SGL_RS07980 - threonine synthase, at 1,303,295 to 1,304,596
_RS07980
Position (kb)
1301
1302
1303 Strain fitness (log2 ratio)
-1
0
1 at 1300.761 kb on + strand, within SGL_RS07970 at 1300.871 kb on + strand, within SGL_RS07970 at 1300.872 kb on + strand, within SGL_RS07970 at 1300.879 kb on - strand, within SGL_RS07970 at 1300.901 kb on + strand, within SGL_RS07970 at 1300.901 kb on + strand, within SGL_RS07970 at 1300.909 kb on - strand, within SGL_RS07970 at 1300.949 kb on - strand, within SGL_RS07970 at 1301.014 kb on - strand, within SGL_RS07970 at 1301.021 kb on + strand, within SGL_RS07970 at 1301.029 kb on - strand, within SGL_RS07970 at 1301.039 kb on - strand, within SGL_RS07970 at 1301.039 kb on - strand, within SGL_RS07970 at 1301.039 kb on - strand, within SGL_RS07970 at 1301.039 kb on - strand, within SGL_RS07970 at 1301.039 kb on - strand, within SGL_RS07970 at 1301.109 kb on + strand, within SGL_RS07970 at 1301.121 kb on + strand, within SGL_RS07970 at 1301.137 kb on + strand, within SGL_RS07970 at 1301.137 kb on - strand, within SGL_RS07970 at 1301.182 kb on - strand, within SGL_RS07970 at 1301.197 kb on - strand, within SGL_RS07970 at 1301.224 kb on + strand, within SGL_RS07970 at 1301.424 kb on + strand, within SGL_RS07970 at 1301.429 kb on + strand, within SGL_RS07970 at 1301.457 kb on - strand, within SGL_RS07970 at 1301.462 kb on - strand, within SGL_RS07970 at 1301.538 kb on - strand, within SGL_RS07970 at 1301.572 kb on - strand at 1301.579 kb on + strand at 1301.634 kb on + strand at 1301.770 kb on - strand at 1301.792 kb on + strand, within SGL_RS07975 at 1301.985 kb on + strand, within SGL_RS07975 at 1302.001 kb on - strand, within SGL_RS07975 at 1302.046 kb on + strand, within SGL_RS07975 at 1302.196 kb on + strand, within SGL_RS07975 at 1302.308 kb on - strand, within SGL_RS07975 at 1302.323 kb on - strand, within SGL_RS07975 at 1302.419 kb on + strand, within SGL_RS07975 at 1302.456 kb on - strand, within SGL_RS07975 at 1302.575 kb on - strand, within SGL_RS07975 at 1302.608 kb on - strand, within SGL_RS07975 at 1302.839 kb on - strand at 1302.920 kb on - strand at 1302.920 kb on - strand at 1303.181 kb on - strand at 1303.343 kb on + strand at 1303.362 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,300,761 + SGL_RS07970 0.10 +0.2 1,300,871 + SGL_RS07970 0.21 +0.5 1,300,872 + SGL_RS07970 0.21 -0.2 1,300,879 - SGL_RS07970 0.22 -0.2 1,300,901 + SGL_RS07970 0.24 +0.1 1,300,901 + SGL_RS07970 0.24 -0.3 1,300,909 - SGL_RS07970 0.25 -0.7 1,300,949 - SGL_RS07970 0.29 -0.1 1,301,014 - SGL_RS07970 0.35 +0.2 1,301,021 + SGL_RS07970 0.36 -0.4 1,301,029 - SGL_RS07970 0.37 +0.1 1,301,039 - SGL_RS07970 0.38 +0.3 1,301,039 - SGL_RS07970 0.38 +0.1 1,301,039 - SGL_RS07970 0.38 +0.1 1,301,039 - SGL_RS07970 0.38 -0.3 1,301,039 - SGL_RS07970 0.38 -0.8 1,301,109 + SGL_RS07970 0.45 +0.1 1,301,121 + SGL_RS07970 0.46 +0.1 1,301,137 + SGL_RS07970 0.48 -0.2 1,301,137 - SGL_RS07970 0.48 -0.3 1,301,182 - SGL_RS07970 0.52 +0.1 1,301,197 - SGL_RS07970 0.54 +0.2 1,301,224 + SGL_RS07970 0.57 +0.3 1,301,424 + SGL_RS07970 0.77 -0.1 1,301,429 + SGL_RS07970 0.77 +0.1 1,301,457 - SGL_RS07970 0.80 -0.1 1,301,462 - SGL_RS07970 0.80 +0.1 1,301,538 - SGL_RS07970 0.88 +0.1 1,301,572 - +0.1 1,301,579 + +0.2 1,301,634 + -0.1 1,301,770 - +0.4 1,301,792 + SGL_RS07975 0.11 +0.0 1,301,985 + SGL_RS07975 0.28 +0.1 1,302,001 - SGL_RS07975 0.30 -0.5 1,302,046 + SGL_RS07975 0.34 +0.2 1,302,196 + SGL_RS07975 0.47 -0.1 1,302,308 - SGL_RS07975 0.57 +0.7 1,302,323 - SGL_RS07975 0.59 +0.2 1,302,419 + SGL_RS07975 0.67 +0.0 1,302,456 - SGL_RS07975 0.71 +0.3 1,302,575 - SGL_RS07975 0.81 +0.3 1,302,608 - SGL_RS07975 0.84 +1.3 1,302,839 - +0.3 1,302,920 - +0.1 1,302,920 - +0.1 1,303,181 - -0.1 1,303,343 + +0.1 1,303,362 - +0.2
Or see this region's nucleotide sequence