Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS07720 and SGL_RS07725 are separated by 57 nucleotides SGL_RS07725 and SGL_RS07730 are separated by 61 nucleotides SGL_RS07730 and SGL_RS07735 are separated by 53 nucleotides SGL_RS07735 and SGL_RS07740 are separated by 159 nucleotides
SGL_RS07720: SGL_RS07720 - phosphate acetyltransferase, at 1,250,442 to 1,252,535
_RS07720
SGL_RS07725: SGL_RS07725 - hypothetical protein, at 1,252,593 to 1,253,207
_RS07725
SGL_RS07730: SGL_RS07730 - DNA/RNA nuclease SfsA, at 1,253,269 to 1,253,982
_RS07730
SGL_RS07735: SGL_RS07735 - DUF1997 domain-containing protein, at 1,254,036 to 1,254,623
_RS07735
SGL_RS07740: SGL_RS07740 - RNA polymerase sigma factor, RpoD/SigA family, at 1,254,783 to 1,255,739
_RS07740
Position (kb)
1253
1254 Strain fitness (log2 ratio)
-1
0
1 at 1252.285 kb on - strand, within SGL_RS07720 at 1252.292 kb on + strand, within SGL_RS07720 at 1252.302 kb on - strand, within SGL_RS07720 at 1252.387 kb on + strand at 1252.725 kb on + strand, within SGL_RS07725 at 1252.733 kb on - strand, within SGL_RS07725 at 1252.855 kb on + strand, within SGL_RS07725 at 1252.941 kb on - strand, within SGL_RS07725 at 1252.971 kb on - strand, within SGL_RS07725 at 1253.205 kb on - strand at 1253.283 kb on - strand at 1253.354 kb on + strand, within SGL_RS07730 at 1253.443 kb on + strand, within SGL_RS07730 at 1253.704 kb on - strand, within SGL_RS07730 at 1253.776 kb on + strand, within SGL_RS07730 at 1253.776 kb on + strand, within SGL_RS07730 at 1253.815 kb on - strand, within SGL_RS07730 at 1253.852 kb on - strand, within SGL_RS07730 at 1253.852 kb on - strand, within SGL_RS07730 at 1253.870 kb on - strand, within SGL_RS07730 at 1253.876 kb on + strand, within SGL_RS07730 at 1253.950 kb on + strand at 1254.100 kb on + strand, within SGL_RS07735 at 1254.108 kb on + strand, within SGL_RS07735 at 1254.211 kb on - strand, within SGL_RS07735 at 1254.272 kb on + strand, within SGL_RS07735 at 1254.280 kb on - strand, within SGL_RS07735 at 1254.332 kb on + strand, within SGL_RS07735 at 1254.567 kb on - strand at 1254.571 kb on + strand at 1254.903 kb on + strand, within SGL_RS07740 at 1254.911 kb on - strand, within SGL_RS07740 at 1254.917 kb on - strand, within SGL_RS07740
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,252,285 - SGL_RS07720 0.88 +0.1 1,252,292 + SGL_RS07720 0.88 -0.1 1,252,302 - SGL_RS07720 0.89 +0.2 1,252,387 + +0.0 1,252,725 + SGL_RS07725 0.21 -0.0 1,252,733 - SGL_RS07725 0.23 -0.5 1,252,855 + SGL_RS07725 0.43 +0.3 1,252,941 - SGL_RS07725 0.57 -1.1 1,252,971 - SGL_RS07725 0.61 -0.2 1,253,205 - -0.5 1,253,283 - -0.2 1,253,354 + SGL_RS07730 0.12 +0.2 1,253,443 + SGL_RS07730 0.24 +0.7 1,253,704 - SGL_RS07730 0.61 +0.3 1,253,776 + SGL_RS07730 0.71 +0.1 1,253,776 + SGL_RS07730 0.71 +0.8 1,253,815 - SGL_RS07730 0.76 +0.2 1,253,852 - SGL_RS07730 0.82 +1.4 1,253,852 - SGL_RS07730 0.82 -0.3 1,253,870 - SGL_RS07730 0.84 -0.1 1,253,876 + SGL_RS07730 0.85 +0.1 1,253,950 + +0.5 1,254,100 + SGL_RS07735 0.11 +0.2 1,254,108 + SGL_RS07735 0.12 +0.2 1,254,211 - SGL_RS07735 0.30 -0.1 1,254,272 + SGL_RS07735 0.40 -0.0 1,254,280 - SGL_RS07735 0.41 +0.1 1,254,332 + SGL_RS07735 0.50 -0.4 1,254,567 - -0.2 1,254,571 + -0.5 1,254,903 + SGL_RS07740 0.13 -0.8 1,254,911 - SGL_RS07740 0.13 +0.3 1,254,917 - SGL_RS07740 0.14 +1.2
Or see this region's nucleotide sequence