Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS07370 and SGL_RS07375 are separated by 46 nucleotides SGL_RS07375 and SGL_RS07380 are separated by 61 nucleotides
SGL_RS07370: SGL_RS07370 - hypothetical protein, at 1,183,660 to 1,184,664
_RS07370
SGL_RS07375: SGL_RS07375 - heme-binding protein, at 1,184,711 to 1,185,238
_RS07375
SGL_RS07380: SGL_RS07380 - polysaccharide deacetylase family protein, at 1,185,300 to 1,186,307
_RS07380
Position (kb)
1184
1185
1186 Strain fitness (log2 ratio)
-1
0
1 at 1183.752 kb on + strand at 1183.878 kb on + strand, within SGL_RS07370 at 1184.052 kb on - strand, within SGL_RS07370 at 1184.109 kb on - strand, within SGL_RS07370 at 1184.152 kb on + strand, within SGL_RS07370 at 1184.198 kb on + strand, within SGL_RS07370 at 1184.442 kb on + strand, within SGL_RS07370 at 1184.866 kb on + strand, within SGL_RS07375 at 1184.874 kb on + strand, within SGL_RS07375 at 1184.874 kb on + strand, within SGL_RS07375 at 1184.874 kb on + strand, within SGL_RS07375 at 1184.874 kb on + strand, within SGL_RS07375 at 1184.874 kb on + strand, within SGL_RS07375 at 1184.874 kb on + strand, within SGL_RS07375 at 1184.882 kb on - strand, within SGL_RS07375 at 1184.882 kb on - strand, within SGL_RS07375 at 1184.904 kb on + strand, within SGL_RS07375 at 1184.982 kb on + strand, within SGL_RS07375 at 1185.008 kb on + strand, within SGL_RS07375 at 1185.051 kb on - strand, within SGL_RS07375 at 1185.079 kb on + strand, within SGL_RS07375 at 1185.182 kb on + strand, within SGL_RS07375 at 1185.541 kb on - strand, within SGL_RS07380 at 1185.576 kb on + strand, within SGL_RS07380 at 1185.579 kb on - strand, within SGL_RS07380 at 1185.600 kb on + strand, within SGL_RS07380 at 1185.634 kb on + strand, within SGL_RS07380 at 1185.732 kb on + strand, within SGL_RS07380 at 1185.732 kb on + strand, within SGL_RS07380 at 1185.770 kb on - strand, within SGL_RS07380 at 1185.876 kb on + strand, within SGL_RS07380 at 1185.972 kb on - strand, within SGL_RS07380 at 1186.054 kb on + strand, within SGL_RS07380
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,183,752 + +0.3 1,183,878 + SGL_RS07370 0.22 +0.1 1,184,052 - SGL_RS07370 0.39 +0.1 1,184,109 - SGL_RS07370 0.45 +0.1 1,184,152 + SGL_RS07370 0.49 -0.2 1,184,198 + SGL_RS07370 0.54 +0.3 1,184,442 + SGL_RS07370 0.78 -0.4 1,184,866 + SGL_RS07375 0.29 +0.1 1,184,874 + SGL_RS07375 0.31 +0.1 1,184,874 + SGL_RS07375 0.31 +0.5 1,184,874 + SGL_RS07375 0.31 +0.5 1,184,874 + SGL_RS07375 0.31 +0.1 1,184,874 + SGL_RS07375 0.31 -0.1 1,184,874 + SGL_RS07375 0.31 +1.1 1,184,882 - SGL_RS07375 0.32 +0.5 1,184,882 - SGL_RS07375 0.32 +0.5 1,184,904 + SGL_RS07375 0.37 -0.1 1,184,982 + SGL_RS07375 0.51 -0.3 1,185,008 + SGL_RS07375 0.56 +0.3 1,185,051 - SGL_RS07375 0.64 -0.0 1,185,079 + SGL_RS07375 0.70 +0.3 1,185,182 + SGL_RS07375 0.89 +0.4 1,185,541 - SGL_RS07380 0.24 -0.1 1,185,576 + SGL_RS07380 0.27 +0.1 1,185,579 - SGL_RS07380 0.28 +0.6 1,185,600 + SGL_RS07380 0.30 -0.3 1,185,634 + SGL_RS07380 0.33 -0.2 1,185,732 + SGL_RS07380 0.43 -0.1 1,185,732 + SGL_RS07380 0.43 +0.2 1,185,770 - SGL_RS07380 0.47 +0.3 1,185,876 + SGL_RS07380 0.57 -0.0 1,185,972 - SGL_RS07380 0.67 -0.1 1,186,054 + SGL_RS07380 0.75 -1.3
Or see this region's nucleotide sequence