Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS07375

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS07370 and SGL_RS07375 are separated by 46 nucleotidesSGL_RS07375 and SGL_RS07380 are separated by 61 nucleotides SGL_RS07370: SGL_RS07370 - hypothetical protein, at 1,183,660 to 1,184,664 _RS07370 SGL_RS07375: SGL_RS07375 - heme-binding protein, at 1,184,711 to 1,185,238 _RS07375 SGL_RS07380: SGL_RS07380 - polysaccharide deacetylase family protein, at 1,185,300 to 1,186,307 _RS07380 Position (kb) 1184 1185 1186Strain fitness (log2 ratio) -1 0 1at 1183.752 kb on + strandat 1183.878 kb on + strand, within SGL_RS07370at 1184.052 kb on - strand, within SGL_RS07370at 1184.109 kb on - strand, within SGL_RS07370at 1184.152 kb on + strand, within SGL_RS07370at 1184.198 kb on + strand, within SGL_RS07370at 1184.442 kb on + strand, within SGL_RS07370at 1184.866 kb on + strand, within SGL_RS07375at 1184.874 kb on + strand, within SGL_RS07375at 1184.874 kb on + strand, within SGL_RS07375at 1184.874 kb on + strand, within SGL_RS07375at 1184.874 kb on + strand, within SGL_RS07375at 1184.874 kb on + strand, within SGL_RS07375at 1184.874 kb on + strand, within SGL_RS07375at 1184.882 kb on - strand, within SGL_RS07375at 1184.882 kb on - strand, within SGL_RS07375at 1184.904 kb on + strand, within SGL_RS07375at 1184.982 kb on + strand, within SGL_RS07375at 1185.008 kb on + strand, within SGL_RS07375at 1185.051 kb on - strand, within SGL_RS07375at 1185.079 kb on + strand, within SGL_RS07375at 1185.182 kb on + strand, within SGL_RS07375at 1185.541 kb on - strand, within SGL_RS07380at 1185.576 kb on + strand, within SGL_RS07380at 1185.579 kb on - strand, within SGL_RS07380at 1185.600 kb on + strand, within SGL_RS07380at 1185.634 kb on + strand, within SGL_RS07380at 1185.732 kb on + strand, within SGL_RS07380at 1185.732 kb on + strand, within SGL_RS07380at 1185.770 kb on - strand, within SGL_RS07380at 1185.876 kb on + strand, within SGL_RS07380at 1185.972 kb on - strand, within SGL_RS07380at 1186.054 kb on + strand, within SGL_RS07380

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,183,752 + +0.3
1,183,878 + SGL_RS07370 0.22 +0.1
1,184,052 - SGL_RS07370 0.39 +0.1
1,184,109 - SGL_RS07370 0.45 +0.1
1,184,152 + SGL_RS07370 0.49 -0.2
1,184,198 + SGL_RS07370 0.54 +0.3
1,184,442 + SGL_RS07370 0.78 -0.4
1,184,866 + SGL_RS07375 0.29 +0.1
1,184,874 + SGL_RS07375 0.31 +0.1
1,184,874 + SGL_RS07375 0.31 +0.5
1,184,874 + SGL_RS07375 0.31 +0.5
1,184,874 + SGL_RS07375 0.31 +0.1
1,184,874 + SGL_RS07375 0.31 -0.1
1,184,874 + SGL_RS07375 0.31 +1.1
1,184,882 - SGL_RS07375 0.32 +0.5
1,184,882 - SGL_RS07375 0.32 +0.5
1,184,904 + SGL_RS07375 0.37 -0.1
1,184,982 + SGL_RS07375 0.51 -0.3
1,185,008 + SGL_RS07375 0.56 +0.3
1,185,051 - SGL_RS07375 0.64 -0.0
1,185,079 + SGL_RS07375 0.70 +0.3
1,185,182 + SGL_RS07375 0.89 +0.4
1,185,541 - SGL_RS07380 0.24 -0.1
1,185,576 + SGL_RS07380 0.27 +0.1
1,185,579 - SGL_RS07380 0.28 +0.6
1,185,600 + SGL_RS07380 0.30 -0.3
1,185,634 + SGL_RS07380 0.33 -0.2
1,185,732 + SGL_RS07380 0.43 -0.1
1,185,732 + SGL_RS07380 0.43 +0.2
1,185,770 - SGL_RS07380 0.47 +0.3
1,185,876 + SGL_RS07380 0.57 -0.0
1,185,972 - SGL_RS07380 0.67 -0.1
1,186,054 + SGL_RS07380 0.75 -1.3

Or see this region's nucleotide sequence