Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS06910

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS06900 and SGL_RS06905 are separated by 19 nucleotidesSGL_RS06905 and SGL_RS06910 are separated by 156 nucleotidesSGL_RS06910 and SGL_RS06915 are separated by 342 nucleotides SGL_RS06900: SGL_RS06900 - hypothetical protein, at 1,075,996 to 1,076,454 _RS06900 SGL_RS06905: SGL_RS06905 - Uma2 family endonuclease, at 1,076,474 to 1,077,010 _RS06905 SGL_RS06910: SGL_RS06910 - DUF2442 domain-containing protein, at 1,077,167 to 1,077,412 _RS06910 SGL_RS06915: SGL_RS06915 - RnfABCDGE type electron transport complex subunit D, at 1,077,755 to 1,078,612 _RS06915 Position (kb) 1077 1078Strain fitness (log2 ratio) -1 0 1at 1076.265 kb on - strand, within SGL_RS06900at 1076.565 kb on - strand, within SGL_RS06905at 1076.732 kb on - strand, within SGL_RS06905at 1076.787 kb on + strand, within SGL_RS06905at 1076.824 kb on - strand, within SGL_RS06905at 1076.865 kb on + strand, within SGL_RS06905at 1077.158 kb on + strandat 1077.230 kb on - strand, within SGL_RS06910at 1077.367 kb on + strand, within SGL_RS06910at 1077.616 kb on - strandat 1077.695 kb on - strandat 1077.706 kb on - strandat 1077.835 kb on + strandat 1077.877 kb on - strand, within SGL_RS06915at 1077.877 kb on - strand, within SGL_RS06915at 1078.247 kb on + strand, within SGL_RS06915at 1078.373 kb on - strand, within SGL_RS06915at 1078.384 kb on + strand, within SGL_RS06915at 1078.393 kb on - strand, within SGL_RS06915

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,076,265 - SGL_RS06900 0.59 -0.1
1,076,565 - SGL_RS06905 0.17 +0.1
1,076,732 - SGL_RS06905 0.48 +0.2
1,076,787 + SGL_RS06905 0.58 -0.1
1,076,824 - SGL_RS06905 0.65 +0.0
1,076,865 + SGL_RS06905 0.73 -0.2
1,077,158 + +0.7
1,077,230 - SGL_RS06910 0.26 +0.7
1,077,367 + SGL_RS06910 0.81 +0.1
1,077,616 - +1.1
1,077,695 - +0.1
1,077,706 - +0.4
1,077,835 + +0.9
1,077,877 - SGL_RS06915 0.14 +0.2
1,077,877 - SGL_RS06915 0.14 +0.9
1,078,247 + SGL_RS06915 0.57 +0.4
1,078,373 - SGL_RS06915 0.72 +0.1
1,078,384 + SGL_RS06915 0.73 +0.4
1,078,393 - SGL_RS06915 0.74 -0.2

Or see this region's nucleotide sequence