Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06900 and SGL_RS06905 are separated by 19 nucleotides SGL_RS06905 and SGL_RS06910 are separated by 156 nucleotides SGL_RS06910 and SGL_RS06915 are separated by 342 nucleotides
SGL_RS06900: SGL_RS06900 - hypothetical protein, at 1,075,996 to 1,076,454
_RS06900
SGL_RS06905: SGL_RS06905 - Uma2 family endonuclease, at 1,076,474 to 1,077,010
_RS06905
SGL_RS06910: SGL_RS06910 - DUF2442 domain-containing protein, at 1,077,167 to 1,077,412
_RS06910
SGL_RS06915: SGL_RS06915 - RnfABCDGE type electron transport complex subunit D, at 1,077,755 to 1,078,612
_RS06915
Position (kb)
1077
1078 Strain fitness (log2 ratio)
-1
0
1 at 1076.265 kb on - strand, within SGL_RS06900 at 1076.565 kb on - strand, within SGL_RS06905 at 1076.732 kb on - strand, within SGL_RS06905 at 1076.787 kb on + strand, within SGL_RS06905 at 1076.824 kb on - strand, within SGL_RS06905 at 1076.865 kb on + strand, within SGL_RS06905 at 1077.158 kb on + strand at 1077.230 kb on - strand, within SGL_RS06910 at 1077.367 kb on + strand, within SGL_RS06910 at 1077.616 kb on - strand at 1077.695 kb on - strand at 1077.706 kb on - strand at 1077.835 kb on + strand at 1077.877 kb on - strand, within SGL_RS06915 at 1077.877 kb on - strand, within SGL_RS06915 at 1078.247 kb on + strand, within SGL_RS06915 at 1078.373 kb on - strand, within SGL_RS06915 at 1078.384 kb on + strand, within SGL_RS06915 at 1078.393 kb on - strand, within SGL_RS06915
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,076,265 - SGL_RS06900 0.59 -0.1 1,076,565 - SGL_RS06905 0.17 +0.1 1,076,732 - SGL_RS06905 0.48 +0.2 1,076,787 + SGL_RS06905 0.58 -0.1 1,076,824 - SGL_RS06905 0.65 +0.0 1,076,865 + SGL_RS06905 0.73 -0.2 1,077,158 + +0.7 1,077,230 - SGL_RS06910 0.26 +0.7 1,077,367 + SGL_RS06910 0.81 +0.1 1,077,616 - +1.1 1,077,695 - +0.1 1,077,706 - +0.4 1,077,835 + +0.9 1,077,877 - SGL_RS06915 0.14 +0.2 1,077,877 - SGL_RS06915 0.14 +0.9 1,078,247 + SGL_RS06915 0.57 +0.4 1,078,373 - SGL_RS06915 0.72 +0.1 1,078,384 + SGL_RS06915 0.73 +0.4 1,078,393 - SGL_RS06915 0.74 -0.2
Or see this region's nucleotide sequence