Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06660 and SGL_RS06665 are separated by 165 nucleotides SGL_RS06665 and SGL_RS06670 are separated by 172 nucleotides SGL_RS06670 and SGL_RS06675 are separated by 68 nucleotides
SGL_RS06660: SGL_RS06660 - DNA helicase PcrA, at 1,022,278 to 1,024,659
_RS06660
SGL_RS06665: SGL_RS06665 - bifunctional nuclease family protein, at 1,024,825 to 1,025,346
_RS06665
SGL_RS06670: SGL_RS06670 - TIGR01777 family oxidoreductase, at 1,025,519 to 1,026,442
_RS06670
SGL_RS06675: SGL_RS06675 - ABC transporter ATP-binding protein, at 1,026,511 to 1,027,737
_RS06675
Position (kb)
1025
1026
1027 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1024.524 kb on + strand at 1024.559 kb on + strand at 1024.624 kb on - strand at 1024.626 kb on + strand at 1024.626 kb on + strand at 1024.634 kb on - strand at 1024.671 kb on + strand at 1024.793 kb on + strand at 1024.866 kb on - strand at 1024.879 kb on - strand, within SGL_RS06665 at 1025.070 kb on + strand, within SGL_RS06665 at 1025.070 kb on + strand, within SGL_RS06665 at 1025.072 kb on + strand, within SGL_RS06665 at 1025.075 kb on + strand, within SGL_RS06665 at 1025.075 kb on + strand, within SGL_RS06665 at 1025.078 kb on - strand, within SGL_RS06665 at 1025.078 kb on - strand, within SGL_RS06665 at 1025.276 kb on + strand, within SGL_RS06665 at 1025.420 kb on + strand at 1025.421 kb on - strand at 1025.428 kb on - strand at 1025.590 kb on - strand at 1025.616 kb on + strand, within SGL_RS06670 at 1025.628 kb on - strand, within SGL_RS06670 at 1025.703 kb on + strand, within SGL_RS06670 at 1025.974 kb on + strand, within SGL_RS06670 at 1026.038 kb on + strand, within SGL_RS06670 at 1026.082 kb on + strand, within SGL_RS06670 at 1026.114 kb on + strand, within SGL_RS06670 at 1026.225 kb on - strand, within SGL_RS06670 at 1026.263 kb on + strand, within SGL_RS06670 at 1026.456 kb on - strand at 1026.597 kb on + strand at 1026.811 kb on - strand, within SGL_RS06675 at 1026.817 kb on + strand, within SGL_RS06675 at 1026.896 kb on + strand, within SGL_RS06675 at 1027.087 kb on - strand, within SGL_RS06675 at 1027.239 kb on + strand, within SGL_RS06675 at 1027.304 kb on - strand, within SGL_RS06675 at 1027.349 kb on + strand, within SGL_RS06675
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,024,524 + +0.5 1,024,559 + +1.3 1,024,624 - +0.3 1,024,626 + -0.1 1,024,626 + -0.2 1,024,634 - +0.2 1,024,671 + -0.0 1,024,793 + +0.2 1,024,866 - +0.1 1,024,879 - SGL_RS06665 0.10 -0.0 1,025,070 + SGL_RS06665 0.47 -0.8 1,025,070 + SGL_RS06665 0.47 -0.9 1,025,072 + SGL_RS06665 0.47 -0.8 1,025,075 + SGL_RS06665 0.48 +0.1 1,025,075 + SGL_RS06665 0.48 -0.4 1,025,078 - SGL_RS06665 0.48 -0.6 1,025,078 - SGL_RS06665 0.48 -0.2 1,025,276 + SGL_RS06665 0.86 +0.3 1,025,420 + +0.2 1,025,421 - -0.1 1,025,428 - -0.3 1,025,590 - +0.1 1,025,616 + SGL_RS06670 0.10 +0.7 1,025,628 - SGL_RS06670 0.12 +0.4 1,025,703 + SGL_RS06670 0.20 +0.2 1,025,974 + SGL_RS06670 0.49 +0.3 1,026,038 + SGL_RS06670 0.56 -0.3 1,026,082 + SGL_RS06670 0.61 -0.1 1,026,114 + SGL_RS06670 0.64 +0.5 1,026,225 - SGL_RS06670 0.76 +0.1 1,026,263 + SGL_RS06670 0.81 +1.3 1,026,456 - +0.4 1,026,597 + -1.3 1,026,811 - SGL_RS06675 0.24 -3.2 1,026,817 + SGL_RS06675 0.25 -4.6 1,026,896 + SGL_RS06675 0.31 -2.2 1,027,087 - SGL_RS06675 0.47 -2.3 1,027,239 + SGL_RS06675 0.59 -2.6 1,027,304 - SGL_RS06675 0.65 -2.3 1,027,349 + SGL_RS06675 0.68 -3.9
Or see this region's nucleotide sequence