Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS06570

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS06560 and SGL_RS06565 are separated by 75 nucleotidesSGL_RS06565 and SGL_RS06570 are separated by 70 nucleotidesSGL_RS06570 and SGL_RS06575 are separated by 15 nucleotides SGL_RS06560: SGL_RS06560 - hypothetical protein, at 999,083 to 1,001,563 _RS06560 SGL_RS06565: SGL_RS06565 - nitrate reductase associated protein, at 1,001,639 to 1,002,106 _RS06565 SGL_RS06570: SGL_RS06570 - DUF29 domain-containing protein, at 1,002,177 to 1,002,617 _RS06570 SGL_RS06575: SGL_RS06575 - nitrate reductase, at 1,002,633 to 1,004,777 _RS06575 Position (kb) 1002 1003Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1002.036 kb on + strand, within SGL_RS06565at 1002.367 kb on - strand, within SGL_RS06570at 1002.719 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,002,036 + SGL_RS06565 0.85 -3.2
1,002,367 - SGL_RS06570 0.43 +0.4
1,002,719 - -4.2

Or see this region's nucleotide sequence