Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS05170

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS05165 and SGL_RS05170 are separated by 277 nucleotidesSGL_RS05170 and SGL_RS05175 are separated by 238 nucleotides SGL_RS05165: SGL_RS05165 - hypothetical protein, at 708,189 to 708,812 _RS05165 SGL_RS05170: SGL_RS05170 - hypothetical protein, at 709,090 to 709,797 _RS05170 SGL_RS05175: SGL_RS05175 - 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG, at 710,036 to 710,977 _RS05175 Position (kb) 709 710Strain fitness (log2 ratio) -1 0 1at 708.553 kb on - strand, within SGL_RS05165at 708.604 kb on + strand, within SGL_RS05165at 708.647 kb on + strand, within SGL_RS05165at 708.670 kb on - strand, within SGL_RS05165at 708.670 kb on - strand, within SGL_RS05165at 708.686 kb on - strand, within SGL_RS05165at 708.791 kb on - strandat 708.816 kb on + strandat 709.207 kb on - strand, within SGL_RS05170at 709.624 kb on + strand, within SGL_RS05170at 709.665 kb on + strand, within SGL_RS05170at 710.318 kb on + strand, within SGL_RS05175at 710.388 kb on + strand, within SGL_RS05175at 710.388 kb on + strand, within SGL_RS05175at 710.452 kb on + strand, within SGL_RS05175

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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708,553 - SGL_RS05165 0.58 -0.0
708,604 + SGL_RS05165 0.67 -0.4
708,647 + SGL_RS05165 0.73 -1.1
708,670 - SGL_RS05165 0.77 -0.1
708,670 - SGL_RS05165 0.77 +0.1
708,686 - SGL_RS05165 0.80 +0.1
708,791 - +0.5
708,816 + -0.3
709,207 - SGL_RS05170 0.17 +0.2
709,624 + SGL_RS05170 0.75 +0.8
709,665 + SGL_RS05170 0.81 +0.1
710,318 + SGL_RS05175 0.30 +0.1
710,388 + SGL_RS05175 0.37 -0.1
710,388 + SGL_RS05175 0.37 +0.0
710,452 + SGL_RS05175 0.44 -0.9

Or see this region's nucleotide sequence