Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS04880 and SGL_RS04885 are separated by 6 nucleotides SGL_RS04885 and SGL_RS04890 are separated by 28 nucleotides SGL_RS04890 and SGL_RS04895 are separated by 66 nucleotides SGL_RS04895 and SGL_RS04900 are separated by 8 nucleotides
SGL_RS04880: SGL_RS04880 - cupin domain-containing protein, at 642,153 to 642,467
_RS04880
SGL_RS04885: SGL_RS04885 - PAP/fibrillin family protein, at 642,474 to 643,115
_RS04885
SGL_RS04890: SGL_RS04890 - hypothetical protein, at 643,144 to 643,482
_RS04890
SGL_RS04895: SGL_RS04895 - S-formylglutathione hydrolase, at 643,549 to 644,379
_RS04895
SGL_RS04900: SGL_RS04900 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, at 644,388 to 645,497
_RS04900
Position (kb) 643
644 Strain fitness (log2 ratio) -1
0
1 at 642.285 kb on + strand, within SGL_RS04880 at 642.293 kb on - strand, within SGL_RS04880 at 642.647 kb on + strand, within SGL_RS04885 at 642.655 kb on - strand, within SGL_RS04885 at 642.882 kb on + strand, within SGL_RS04885 at 642.984 kb on + strand, within SGL_RS04885 at 643.256 kb on + strand, within SGL_RS04890 at 643.823 kb on + strand, within SGL_RS04895 at 643.866 kb on + strand, within SGL_RS04895 at 644.053 kb on - strand, within SGL_RS04895 at 644.053 kb on - strand, within SGL_RS04895 at 644.095 kb on + strand, within SGL_RS04895 at 644.126 kb on + strand, within SGL_RS04895 at 644.313 kb on - strand at 644.313 kb on - strand at 644.432 kb on + strand at 644.433 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 642,285 + SGL_RS04880 0.42 +0.2 642,293 - SGL_RS04880 0.44 -1.5 642,647 + SGL_RS04885 0.27 +0.0 642,655 - SGL_RS04885 0.28 -0.4 642,882 + SGL_RS04885 0.64 -0.9 642,984 + SGL_RS04885 0.79 -0.7 643,256 + SGL_RS04890 0.33 +0.3 643,823 + SGL_RS04895 0.33 -0.4 643,866 + SGL_RS04895 0.38 +0.7 644,053 - SGL_RS04895 0.61 -0.1 644,053 - SGL_RS04895 0.61 +0.3 644,095 + SGL_RS04895 0.66 -0.1 644,126 + SGL_RS04895 0.69 -0.1 644,313 - -0.0 644,313 - -0.7 644,432 + +0.1 644,433 + +0.0
Or see this region's nucleotide sequence