Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02810 and SGL_RS02815 are separated by 219 nucleotides SGL_RS02815 and SGL_RS02820 are separated by 28 nucleotides
SGL_RS02810: SGL_RS02810 - EAL domain-containing protein, at 197,633 to 200,185
_RS02810
SGL_RS02815: SGL_RS02815 - EAL domain-containing protein, at 200,405 to 202,525
_RS02815
SGL_RS02820: SGL_RS02820 - EAL domain-containing protein, at 202,554 to 204,395
_RS02820
Position (kb) 200
201
202
203 Strain fitness (log2 ratio) -1
0
1 at 199.486 kb on - strand, within SGL_RS02810 at 199.532 kb on + strand, within SGL_RS02810 at 199.701 kb on + strand, within SGL_RS02810 at 199.761 kb on - strand, within SGL_RS02810 at 199.834 kb on + strand, within SGL_RS02810 at 199.849 kb on - strand, within SGL_RS02810 at 200.040 kb on - strand at 200.108 kb on - strand at 200.394 kb on + strand at 200.695 kb on - strand, within SGL_RS02815 at 200.722 kb on + strand, within SGL_RS02815 at 200.730 kb on - strand, within SGL_RS02815 at 200.730 kb on - strand, within SGL_RS02815 at 200.730 kb on - strand, within SGL_RS02815 at 200.779 kb on + strand, within SGL_RS02815 at 200.794 kb on + strand, within SGL_RS02815 at 200.855 kb on - strand, within SGL_RS02815 at 200.927 kb on - strand, within SGL_RS02815 at 201.012 kb on + strand, within SGL_RS02815 at 201.303 kb on - strand, within SGL_RS02815 at 201.379 kb on - strand, within SGL_RS02815 at 201.550 kb on - strand, within SGL_RS02815 at 201.593 kb on - strand, within SGL_RS02815 at 201.787 kb on - strand, within SGL_RS02815 at 201.955 kb on - strand, within SGL_RS02815 at 202.014 kb on + strand, within SGL_RS02815 at 202.014 kb on + strand, within SGL_RS02815 at 202.022 kb on - strand, within SGL_RS02815 at 202.024 kb on + strand, within SGL_RS02815 at 202.034 kb on - strand, within SGL_RS02815 at 202.089 kb on + strand, within SGL_RS02815 at 202.118 kb on - strand, within SGL_RS02815 at 202.234 kb on + strand, within SGL_RS02815 at 202.533 kb on - strand at 202.943 kb on - strand, within SGL_RS02820 at 203.307 kb on + strand, within SGL_RS02820 at 203.312 kb on + strand, within SGL_RS02820 at 203.315 kb on - strand, within SGL_RS02820 at 203.428 kb on - strand, within SGL_RS02820 at 203.492 kb on + strand, within SGL_RS02820 at 203.504 kb on - strand, within SGL_RS02820
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 199,486 - SGL_RS02810 0.73 +0.2 199,532 + SGL_RS02810 0.74 -0.0 199,701 + SGL_RS02810 0.81 +0.0 199,761 - SGL_RS02810 0.83 +1.2 199,834 + SGL_RS02810 0.86 -0.1 199,849 - SGL_RS02810 0.87 -0.1 200,040 - +0.1 200,108 - -0.3 200,394 + +0.2 200,695 - SGL_RS02815 0.14 +0.4 200,722 + SGL_RS02815 0.15 +0.1 200,730 - SGL_RS02815 0.15 +0.2 200,730 - SGL_RS02815 0.15 +0.5 200,730 - SGL_RS02815 0.15 -0.2 200,779 + SGL_RS02815 0.18 +0.9 200,794 + SGL_RS02815 0.18 +0.5 200,855 - SGL_RS02815 0.21 +0.7 200,927 - SGL_RS02815 0.25 +0.4 201,012 + SGL_RS02815 0.29 -0.1 201,303 - SGL_RS02815 0.42 +0.2 201,379 - SGL_RS02815 0.46 +0.4 201,550 - SGL_RS02815 0.54 +0.4 201,593 - SGL_RS02815 0.56 +0.7 201,787 - SGL_RS02815 0.65 +0.0 201,955 - SGL_RS02815 0.73 +0.2 202,014 + SGL_RS02815 0.76 +0.4 202,014 + SGL_RS02815 0.76 +0.2 202,022 - SGL_RS02815 0.76 -0.0 202,024 + SGL_RS02815 0.76 +0.5 202,034 - SGL_RS02815 0.77 +0.2 202,089 + SGL_RS02815 0.79 +0.5 202,118 - SGL_RS02815 0.81 +0.1 202,234 + SGL_RS02815 0.86 +0.2 202,533 - +0.8 202,943 - SGL_RS02820 0.21 -0.1 203,307 + SGL_RS02820 0.41 -0.3 203,312 + SGL_RS02820 0.41 -0.1 203,315 - SGL_RS02820 0.41 +0.3 203,428 - SGL_RS02820 0.47 +0.3 203,492 + SGL_RS02820 0.51 +0.2 203,504 - SGL_RS02820 0.52 +0.1
Or see this region's nucleotide sequence