Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02220 and SGL_RS02225 are separated by 137 nucleotides SGL_RS02225 and SGL_RS02230 are separated by 5 nucleotides SGL_RS02230 and SGL_RS02235 are separated by 31 nucleotides
SGL_RS02220: SGL_RS02220 - phosphoribosylformylglycinamidine synthase subunit PurL, at 78,467 to 80,800
_RS02220
SGL_RS02225: SGL_RS02225 - hypothetical protein, at 80,938 to 81,690
_RS02225
SGL_RS02230: SGL_RS02230 - NUDIX hydrolase, at 81,696 to 82,259
_RS02230
SGL_RS02235: SGL_RS02235 - efflux RND transporter periplasmic adaptor subunit, at 82,291 to 83,853
_RS02235
Position (kb)
81
82
83 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 81.516 kb on - strand, within SGL_RS02225 at 81.654 kb on + strand at 81.777 kb on - strand, within SGL_RS02230 at 81.936 kb on + strand, within SGL_RS02230 at 81.982 kb on + strand, within SGL_RS02230 at 81.995 kb on + strand, within SGL_RS02230 at 81.995 kb on + strand, within SGL_RS02230 at 82.099 kb on - strand, within SGL_RS02230 at 82.100 kb on - strand, within SGL_RS02230 at 82.124 kb on - strand, within SGL_RS02230 at 82.296 kb on + strand at 82.296 kb on + strand at 82.397 kb on - strand at 82.397 kb on - strand at 82.437 kb on + strand at 82.437 kb on + strand at 82.455 kb on - strand, within SGL_RS02235 at 82.459 kb on + strand, within SGL_RS02235 at 82.495 kb on + strand, within SGL_RS02235 at 82.606 kb on + strand, within SGL_RS02235 at 82.639 kb on + strand, within SGL_RS02235 at 82.645 kb on + strand, within SGL_RS02235 at 82.706 kb on - strand, within SGL_RS02235 at 82.902 kb on + strand, within SGL_RS02235 at 82.929 kb on - strand, within SGL_RS02235 at 82.942 kb on + strand, within SGL_RS02235 at 82.942 kb on + strand, within SGL_RS02235 at 82.950 kb on - strand, within SGL_RS02235 at 83.001 kb on - strand, within SGL_RS02235 at 83.066 kb on - strand, within SGL_RS02235 at 83.245 kb on + strand, within SGL_RS02235
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 81,516 - SGL_RS02225 0.77 -2.8 81,654 + -0.3 81,777 - SGL_RS02230 0.14 +0.1 81,936 + SGL_RS02230 0.43 +0.5 81,982 + SGL_RS02230 0.51 +0.3 81,995 + SGL_RS02230 0.53 -0.0 81,995 + SGL_RS02230 0.53 +0.6 82,099 - SGL_RS02230 0.71 -0.1 82,100 - SGL_RS02230 0.72 +0.9 82,124 - SGL_RS02230 0.76 +0.3 82,296 + +0.7 82,296 + +1.2 82,397 - +0.7 82,397 - +0.3 82,437 + -0.2 82,437 + +0.5 82,455 - SGL_RS02235 0.10 -1.4 82,459 + SGL_RS02235 0.11 -0.5 82,495 + SGL_RS02235 0.13 -0.7 82,606 + SGL_RS02235 0.20 -0.1 82,639 + SGL_RS02235 0.22 -0.0 82,645 + SGL_RS02235 0.23 +1.0 82,706 - SGL_RS02235 0.27 +0.5 82,902 + SGL_RS02235 0.39 -0.6 82,929 - SGL_RS02235 0.41 +0.5 82,942 + SGL_RS02235 0.42 -0.4 82,942 + SGL_RS02235 0.42 -0.4 82,950 - SGL_RS02235 0.42 -0.0 83,001 - SGL_RS02235 0.45 -0.1 83,066 - SGL_RS02235 0.50 +0.6 83,245 + SGL_RS02235 0.61 -0.1
Or see this region's nucleotide sequence