Experiment: control for light_bubbling experiments
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14180 and SGL_RS14185 are separated by 114 nucleotides SGL_RS14185 and SGL_RS14190 are separated by 25 nucleotides SGL_RS14190 and SGL_RS14195 are separated by 185 nucleotides
SGL_RS14180: SGL_RS14180 - phosphate ABC transporter ATP-binding protein PstB, at 2,636,828 to 2,637,628
_RS14180
SGL_RS14185: SGL_RS14185 - phosphate ABC transporter ATP-binding protein PstB, at 2,637,743 to 2,638,552
_RS14185
SGL_RS14190: SGL_RS14190 - phosphate ABC transporter permease PstA, at 2,638,578 to 2,639,441
_RS14190
SGL_RS14195: SGL_RS14195 - phosphate ABC transporter permease subunit PstC, at 2,639,627 to 2,640,580
_RS14195
Position (kb)
2638
2639
2640 Strain fitness (log2 ratio)
-2
-1
0
1 at 2637.632 kb on - strand at 2637.706 kb on - strand at 2637.976 kb on + strand, within SGL_RS14185 at 2637.989 kb on + strand, within SGL_RS14185 at 2638.077 kb on - strand, within SGL_RS14185 at 2638.204 kb on - strand, within SGL_RS14185 at 2638.306 kb on - strand, within SGL_RS14185 at 2638.316 kb on + strand, within SGL_RS14185 at 2638.665 kb on - strand, within SGL_RS14190 at 2638.764 kb on + strand, within SGL_RS14190 at 2638.830 kb on + strand, within SGL_RS14190 at 2638.884 kb on - strand, within SGL_RS14190 at 2638.892 kb on + strand, within SGL_RS14190 at 2638.907 kb on - strand, within SGL_RS14190 at 2638.935 kb on + strand, within SGL_RS14190 at 2638.966 kb on - strand, within SGL_RS14190 at 2638.988 kb on + strand, within SGL_RS14190 at 2639.155 kb on - strand, within SGL_RS14190 at 2639.285 kb on + strand, within SGL_RS14190 at 2639.367 kb on - strand at 2639.377 kb on + strand at 2639.405 kb on + strand at 2639.426 kb on + strand at 2639.484 kb on + strand at 2639.698 kb on + strand at 2639.714 kb on + strand at 2639.883 kb on - strand, within SGL_RS14195 at 2640.084 kb on + strand, within SGL_RS14195 at 2640.188 kb on + strand, within SGL_RS14195 at 2640.434 kb on + strand, within SGL_RS14195
Per-strain Table
Position Strand Gene LocusTag Fraction control for light_bubbling experiments remove 2,637,632 - -2.6 2,637,706 - -0.0 2,637,976 + SGL_RS14185 0.29 -1.3 2,637,989 + SGL_RS14185 0.30 -0.9 2,638,077 - SGL_RS14185 0.41 -0.4 2,638,204 - SGL_RS14185 0.57 -1.7 2,638,306 - SGL_RS14185 0.70 -0.9 2,638,316 + SGL_RS14185 0.71 -1.7 2,638,665 - SGL_RS14190 0.10 -1.9 2,638,764 + SGL_RS14190 0.22 -1.7 2,638,830 + SGL_RS14190 0.29 -0.7 2,638,884 - SGL_RS14190 0.35 -0.5 2,638,892 + SGL_RS14190 0.36 -0.9 2,638,907 - SGL_RS14190 0.38 -1.3 2,638,935 + SGL_RS14190 0.41 -1.6 2,638,966 - SGL_RS14190 0.45 -1.5 2,638,988 + SGL_RS14190 0.47 -1.4 2,639,155 - SGL_RS14190 0.67 -0.5 2,639,285 + SGL_RS14190 0.82 -0.9 2,639,367 - -1.4 2,639,377 + -1.3 2,639,405 + -1.8 2,639,426 + -1.5 2,639,484 + -0.3 2,639,698 + -1.3 2,639,714 + -0.1 2,639,883 - SGL_RS14195 0.27 -1.4 2,640,084 + SGL_RS14195 0.48 -2.7 2,640,188 + SGL_RS14195 0.59 -0.9 2,640,434 + SGL_RS14195 0.85 -1.3
Or see this region's nucleotide sequence