Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS15335 and SGL_RS15340 are separated by 171 nucleotides SGL_RS15340 and SGL_RS15345 are separated by 166 nucleotides
SGL_RS15335: SGL_RS15335 - threonine--tRNA ligase, at 2,891,201 to 2,893,012
_RS15335
SGL_RS15340: SGL_RS15340 - Hsp70 family protein, at 2,893,184 to 2,894,779
_RS15340
SGL_RS15345: SGL_RS15345 - FAD-dependent oxidoreductase, at 2,894,946 to 2,896,574
_RS15345
Position (kb)
2893
2894
2895 Strain fitness (log2 ratio)
-1
0
1 at 2893.072 kb on + strand at 2893.100 kb on - strand at 2893.138 kb on + strand at 2893.143 kb on + strand at 2893.151 kb on - strand at 2893.194 kb on - strand at 2893.277 kb on - strand at 2893.289 kb on - strand at 2893.481 kb on - strand, within SGL_RS15340 at 2893.499 kb on + strand, within SGL_RS15340 at 2893.630 kb on + strand, within SGL_RS15340 at 2893.642 kb on + strand, within SGL_RS15340 at 2893.684 kb on + strand, within SGL_RS15340 at 2893.684 kb on + strand, within SGL_RS15340 at 2893.687 kb on - strand, within SGL_RS15340 at 2893.692 kb on - strand, within SGL_RS15340 at 2893.692 kb on - strand, within SGL_RS15340 at 2893.757 kb on + strand, within SGL_RS15340 at 2893.775 kb on + strand, within SGL_RS15340 at 2893.941 kb on + strand, within SGL_RS15340 at 2893.942 kb on - strand, within SGL_RS15340 at 2893.942 kb on - strand, within SGL_RS15340 at 2894.028 kb on - strand, within SGL_RS15340 at 2894.028 kb on - strand, within SGL_RS15340 at 2894.148 kb on + strand, within SGL_RS15340 at 2894.156 kb on - strand, within SGL_RS15340 at 2894.158 kb on - strand, within SGL_RS15340 at 2894.180 kb on - strand, within SGL_RS15340 at 2894.225 kb on + strand, within SGL_RS15340 at 2894.228 kb on - strand, within SGL_RS15340 at 2894.330 kb on - strand, within SGL_RS15340 at 2894.366 kb on - strand, within SGL_RS15340 at 2894.378 kb on - strand, within SGL_RS15340 at 2894.443 kb on - strand, within SGL_RS15340 at 2894.456 kb on - strand, within SGL_RS15340 at 2894.492 kb on - strand, within SGL_RS15340 at 2894.988 kb on + strand at 2894.988 kb on + strand at 2894.988 kb on + strand at 2895.054 kb on + strand at 2895.293 kb on + strand, within SGL_RS15345 at 2895.348 kb on + strand, within SGL_RS15345 at 2895.413 kb on + strand, within SGL_RS15345 at 2895.542 kb on + strand, within SGL_RS15345 at 2895.550 kb on - strand, within SGL_RS15345 at 2895.550 kb on - strand, within SGL_RS15345 at 2895.550 kb on - strand, within SGL_RS15345 at 2895.552 kb on + strand, within SGL_RS15345 at 2895.552 kb on + strand, within SGL_RS15345 at 2895.678 kb on - strand, within SGL_RS15345 at 2895.710 kb on - strand, within SGL_RS15345
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 2,893,072 + -0.1 2,893,100 - -0.8 2,893,138 + +0.1 2,893,143 + -0.2 2,893,151 - -0.3 2,893,194 - +0.1 2,893,277 - -0.2 2,893,289 - -0.3 2,893,481 - SGL_RS15340 0.19 -0.2 2,893,499 + SGL_RS15340 0.20 -0.3 2,893,630 + SGL_RS15340 0.28 -0.7 2,893,642 + SGL_RS15340 0.29 -0.2 2,893,684 + SGL_RS15340 0.31 -0.2 2,893,684 + SGL_RS15340 0.31 -0.2 2,893,687 - SGL_RS15340 0.32 -0.5 2,893,692 - SGL_RS15340 0.32 -0.3 2,893,692 - SGL_RS15340 0.32 +0.0 2,893,757 + SGL_RS15340 0.36 -0.1 2,893,775 + SGL_RS15340 0.37 -0.2 2,893,941 + SGL_RS15340 0.47 +0.1 2,893,942 - SGL_RS15340 0.47 -0.3 2,893,942 - SGL_RS15340 0.47 -0.1 2,894,028 - SGL_RS15340 0.53 +0.0 2,894,028 - SGL_RS15340 0.53 +0.1 2,894,148 + SGL_RS15340 0.60 +0.3 2,894,156 - SGL_RS15340 0.61 -0.3 2,894,158 - SGL_RS15340 0.61 -0.2 2,894,180 - SGL_RS15340 0.62 -0.2 2,894,225 + SGL_RS15340 0.65 -0.3 2,894,228 - SGL_RS15340 0.65 -0.1 2,894,330 - SGL_RS15340 0.72 -0.3 2,894,366 - SGL_RS15340 0.74 -0.4 2,894,378 - SGL_RS15340 0.75 -0.0 2,894,443 - SGL_RS15340 0.79 -0.6 2,894,456 - SGL_RS15340 0.80 -0.3 2,894,492 - SGL_RS15340 0.82 -0.4 2,894,988 + -0.7 2,894,988 + +0.2 2,894,988 + -1.3 2,895,054 + -0.9 2,895,293 + SGL_RS15345 0.21 -0.6 2,895,348 + SGL_RS15345 0.25 -1.5 2,895,413 + SGL_RS15345 0.29 -0.8 2,895,542 + SGL_RS15345 0.37 -0.3 2,895,550 - SGL_RS15345 0.37 -0.2 2,895,550 - SGL_RS15345 0.37 +0.0 2,895,550 - SGL_RS15345 0.37 -0.6 2,895,552 + SGL_RS15345 0.37 -0.2 2,895,552 + SGL_RS15345 0.37 -0.3 2,895,678 - SGL_RS15345 0.45 +0.5 2,895,710 - SGL_RS15345 0.47 -0.9
Or see this region's nucleotide sequence