Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14180 and SGL_RS14185 are separated by 114 nucleotides SGL_RS14185 and SGL_RS14190 are separated by 25 nucleotides SGL_RS14190 and SGL_RS14195 are separated by 185 nucleotides
SGL_RS14180: SGL_RS14180 - phosphate ABC transporter ATP-binding protein PstB, at 2,636,828 to 2,637,628
_RS14180
SGL_RS14185: SGL_RS14185 - phosphate ABC transporter ATP-binding protein PstB, at 2,637,743 to 2,638,552
_RS14185
SGL_RS14190: SGL_RS14190 - phosphate ABC transporter permease PstA, at 2,638,578 to 2,639,441
_RS14190
SGL_RS14195: SGL_RS14195 - phosphate ABC transporter permease subunit PstC, at 2,639,627 to 2,640,580
_RS14195
Position (kb)
2638
2639
2640 Strain fitness (log2 ratio)
-2
-1
0
1 at 2637.632 kb on - strand at 2637.706 kb on - strand at 2637.976 kb on + strand, within SGL_RS14185 at 2637.989 kb on + strand, within SGL_RS14185 at 2638.077 kb on - strand, within SGL_RS14185 at 2638.204 kb on - strand, within SGL_RS14185 at 2638.306 kb on - strand, within SGL_RS14185 at 2638.316 kb on + strand, within SGL_RS14185 at 2638.665 kb on - strand, within SGL_RS14190 at 2638.764 kb on + strand, within SGL_RS14190 at 2638.830 kb on + strand, within SGL_RS14190 at 2638.884 kb on - strand, within SGL_RS14190 at 2638.892 kb on + strand, within SGL_RS14190 at 2638.907 kb on - strand, within SGL_RS14190 at 2638.935 kb on + strand, within SGL_RS14190 at 2638.966 kb on - strand, within SGL_RS14190 at 2638.988 kb on + strand, within SGL_RS14190 at 2639.155 kb on - strand, within SGL_RS14190 at 2639.285 kb on + strand, within SGL_RS14190 at 2639.367 kb on - strand at 2639.377 kb on + strand at 2639.405 kb on + strand at 2639.426 kb on + strand at 2639.484 kb on + strand at 2639.698 kb on + strand at 2639.714 kb on + strand at 2639.883 kb on - strand, within SGL_RS14195 at 2640.084 kb on + strand, within SGL_RS14195 at 2640.188 kb on + strand, within SGL_RS14195 at 2640.434 kb on + strand, within SGL_RS14195
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 2,637,632 - +0.4 2,637,706 - +0.1 2,637,976 + SGL_RS14185 0.29 -0.9 2,637,989 + SGL_RS14185 0.30 -0.6 2,638,077 - SGL_RS14185 0.41 -0.3 2,638,204 - SGL_RS14185 0.57 -1.2 2,638,306 - SGL_RS14185 0.70 -0.4 2,638,316 + SGL_RS14185 0.71 -1.1 2,638,665 - SGL_RS14190 0.10 -1.3 2,638,764 + SGL_RS14190 0.22 -1.1 2,638,830 + SGL_RS14190 0.29 -1.5 2,638,884 - SGL_RS14190 0.35 -0.8 2,638,892 + SGL_RS14190 0.36 -0.5 2,638,907 - SGL_RS14190 0.38 -0.8 2,638,935 + SGL_RS14190 0.41 -1.0 2,638,966 - SGL_RS14190 0.45 -0.9 2,638,988 + SGL_RS14190 0.47 -1.0 2,639,155 - SGL_RS14190 0.67 -1.6 2,639,285 + SGL_RS14190 0.82 -0.6 2,639,367 - -1.1 2,639,377 + -1.3 2,639,405 + -1.4 2,639,426 + -1.4 2,639,484 + -0.0 2,639,698 + -1.9 2,639,714 + -1.0 2,639,883 - SGL_RS14195 0.27 -1.1 2,640,084 + SGL_RS14195 0.48 -0.2 2,640,188 + SGL_RS14195 0.59 -0.5 2,640,434 + SGL_RS14195 0.85 -0.4
Or see this region's nucleotide sequence