Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS04185
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
486,003 | + | SGL_RS04180 | 0.83 | -2.3 | |
486,174 | + | -2.3 | |||
486,384 | - | SGL_RS04185 | 0.13 | -1.8 | |
486,396 | - | SGL_RS04185 | 0.14 | -1.0 | |
486,560 | - | SGL_RS04185 | 0.28 | -1.0 | |
487,039 | + | SGL_RS04185 | 0.72 | -1.0 | |
487,642 | + | -0.1 | |||
487,642 | + | -0.5 | |||
487,648 | - | -0.3 | |||
487,650 | - | -0.1 | |||
487,650 | - | -0.6 | |||
487,650 | - | -0.8 | |||
487,946 | + | SGL_RS04190 | 0.25 | +0.4 | |
487,953 | + | SGL_RS04190 | 0.25 | -0.1 | |
487,961 | - | SGL_RS04190 | 0.26 | +0.8 | |
488,015 | + | SGL_RS04190 | 0.29 | -0.5 | |
488,023 | - | SGL_RS04190 | 0.29 | -0.5 | |
488,132 | - | SGL_RS04190 | 0.35 | -0.9 | |
488,138 | - | SGL_RS04190 | 0.35 | +0.8 | |
488,249 | + | SGL_RS04190 | 0.41 | +0.0 |
Or see this region's nucleotide sequence