Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02800 and SGL_RS02805 are separated by 80 nucleotides SGL_RS02805 and SGL_RS02810 are separated by 75 nucleotides SGL_RS02810 and SGL_RS02815 are separated by 219 nucleotides
SGL_RS02800: SGL_RS02800 - hypothetical protein, at 196,611 to 196,991
_RS02800
SGL_RS02805: SGL_RS02805 - universal stress protein, at 197,072 to 197,557
_RS02805
SGL_RS02810: SGL_RS02810 - EAL domain-containing protein, at 197,633 to 200,185
_RS02810
SGL_RS02815: SGL_RS02815 - EAL domain-containing protein, at 200,405 to 202,525
_RS02815
Position (kb) 197
198
199
200
201 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 196.763 kb on - strand, within SGL_RS02800 at 196.851 kb on + strand, within SGL_RS02800 at 196.882 kb on - strand, within SGL_RS02800 at 196.973 kb on + strand at 196.981 kb on - strand at 197.152 kb on + strand, within SGL_RS02805 at 197.152 kb on + strand, within SGL_RS02805 at 197.153 kb on + strand, within SGL_RS02805 at 197.155 kb on + strand, within SGL_RS02805 at 197.160 kb on - strand, within SGL_RS02805 at 197.276 kb on - strand, within SGL_RS02805 at 197.423 kb on + strand, within SGL_RS02805 at 197.423 kb on - strand, within SGL_RS02805 at 197.433 kb on - strand, within SGL_RS02805 at 197.445 kb on - strand, within SGL_RS02805 at 197.519 kb on + strand at 197.655 kb on + strand at 197.708 kb on + strand at 197.791 kb on + strand at 197.868 kb on + strand at 197.874 kb on - strand at 198.006 kb on + strand, within SGL_RS02810 at 198.235 kb on - strand, within SGL_RS02810 at 198.305 kb on + strand, within SGL_RS02810 at 198.340 kb on + strand, within SGL_RS02810 at 198.464 kb on - strand, within SGL_RS02810 at 198.523 kb on - strand, within SGL_RS02810 at 198.555 kb on + strand, within SGL_RS02810 at 198.583 kb on - strand, within SGL_RS02810 at 198.691 kb on - strand, within SGL_RS02810 at 198.794 kb on + strand, within SGL_RS02810 at 198.802 kb on - strand, within SGL_RS02810 at 198.802 kb on - strand, within SGL_RS02810 at 198.807 kb on - strand, within SGL_RS02810 at 198.875 kb on + strand, within SGL_RS02810 at 198.924 kb on + strand, within SGL_RS02810 at 199.054 kb on - strand, within SGL_RS02810 at 199.155 kb on + strand, within SGL_RS02810 at 199.225 kb on - strand, within SGL_RS02810 at 199.486 kb on - strand, within SGL_RS02810 at 199.532 kb on + strand, within SGL_RS02810 at 199.701 kb on + strand, within SGL_RS02810 at 199.761 kb on - strand, within SGL_RS02810 at 199.834 kb on + strand, within SGL_RS02810 at 199.849 kb on - strand, within SGL_RS02810 at 200.040 kb on - strand at 200.108 kb on - strand at 200.394 kb on + strand at 200.695 kb on - strand, within SGL_RS02815 at 200.722 kb on + strand, within SGL_RS02815 at 200.730 kb on - strand, within SGL_RS02815 at 200.730 kb on - strand, within SGL_RS02815 at 200.730 kb on - strand, within SGL_RS02815 at 200.779 kb on + strand, within SGL_RS02815 at 200.794 kb on + strand, within SGL_RS02815 at 200.855 kb on - strand, within SGL_RS02815 at 200.927 kb on - strand, within SGL_RS02815 at 201.012 kb on + strand, within SGL_RS02815
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 196,763 - SGL_RS02800 0.40 -0.3 196,851 + SGL_RS02800 0.63 -0.3 196,882 - SGL_RS02800 0.71 +0.2 196,973 + -1.1 196,981 - +1.4 197,152 + SGL_RS02805 0.16 -1.3 197,152 + SGL_RS02805 0.16 -0.1 197,153 + SGL_RS02805 0.17 -1.8 197,155 + SGL_RS02805 0.17 -0.2 197,160 - SGL_RS02805 0.18 -1.8 197,276 - SGL_RS02805 0.42 -1.3 197,423 + SGL_RS02805 0.72 -1.9 197,423 - SGL_RS02805 0.72 -1.6 197,433 - SGL_RS02805 0.74 -1.1 197,445 - SGL_RS02805 0.77 -1.2 197,519 + -2.2 197,655 + -2.5 197,708 + -3.7 197,791 + -2.3 197,868 + -1.5 197,874 - -2.4 198,006 + SGL_RS02810 0.15 -1.5 198,235 - SGL_RS02810 0.24 -2.1 198,305 + SGL_RS02810 0.26 -2.5 198,340 + SGL_RS02810 0.28 -2.9 198,464 - SGL_RS02810 0.33 -2.1 198,523 - SGL_RS02810 0.35 -2.4 198,555 + SGL_RS02810 0.36 -2.5 198,583 - SGL_RS02810 0.37 -1.5 198,691 - SGL_RS02810 0.41 -2.1 198,794 + SGL_RS02810 0.45 -1.8 198,802 - SGL_RS02810 0.46 -2.3 198,802 - SGL_RS02810 0.46 -2.2 198,807 - SGL_RS02810 0.46 -2.3 198,875 + SGL_RS02810 0.49 -1.4 198,924 + SGL_RS02810 0.51 -4.2 199,054 - SGL_RS02810 0.56 -2.1 199,155 + SGL_RS02810 0.60 -2.3 199,225 - SGL_RS02810 0.62 -1.8 199,486 - SGL_RS02810 0.73 -2.5 199,532 + SGL_RS02810 0.74 -2.8 199,701 + SGL_RS02810 0.81 -2.4 199,761 - SGL_RS02810 0.83 -3.7 199,834 + SGL_RS02810 0.86 -2.5 199,849 - SGL_RS02810 0.87 -2.1 200,040 - -2.3 200,108 - -2.4 200,394 + +0.8 200,695 - SGL_RS02815 0.14 +0.6 200,722 + SGL_RS02815 0.15 +0.3 200,730 - SGL_RS02815 0.15 +0.4 200,730 - SGL_RS02815 0.15 +0.7 200,730 - SGL_RS02815 0.15 +0.3 200,779 + SGL_RS02815 0.18 +1.2 200,794 + SGL_RS02815 0.18 +0.6 200,855 - SGL_RS02815 0.21 +0.9 200,927 - SGL_RS02815 0.25 +0.3 201,012 + SGL_RS02815 0.29 +0.2
Or see this region's nucleotide sequence