Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02275 and SGL_RS02280 are separated by 645 nucleotides SGL_RS02280 and SGL_RS02285 are separated by 83 nucleotides SGL_RS02285 and SGL_RS02290 are separated by 9 nucleotides
SGL_RS02275: SGL_RS02275 - SPFH domain-containing protein, at 91,517 to 92,482
_RS02275
SGL_RS02280: SGL_RS02280 - Rne/Rng family ribonuclease, at 93,128 to 95,152
_RS02280
SGL_RS02285: SGL_RS02285 - ribonuclease HII, at 95,236 to 95,808
_RS02285
SGL_RS02290: SGL_RS02290 - 8-oxo-dGTP diphosphatase MutT, at 95,818 to 96,228
_RS02290
Position (kb)
93
94
95
96 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 92.354 kb on + strand, within SGL_RS02275 at 92.408 kb on + strand at 92.416 kb on - strand at 92.444 kb on - strand at 92.452 kb on + strand at 92.489 kb on + strand at 92.499 kb on - strand at 92.523 kb on + strand at 92.609 kb on + strand at 92.705 kb on - strand at 92.881 kb on + strand at 92.995 kb on + strand at 93.038 kb on + strand at 94.499 kb on + strand, within SGL_RS02280 at 94.704 kb on - strand, within SGL_RS02280 at 94.723 kb on + strand, within SGL_RS02280 at 94.859 kb on + strand, within SGL_RS02280 at 94.881 kb on - strand, within SGL_RS02280 at 94.907 kb on - strand, within SGL_RS02280 at 94.926 kb on - strand, within SGL_RS02280 at 95.153 kb on + strand at 95.339 kb on + strand, within SGL_RS02285 at 95.346 kb on + strand, within SGL_RS02285 at 95.380 kb on + strand, within SGL_RS02285 at 95.385 kb on + strand, within SGL_RS02285 at 95.397 kb on + strand, within SGL_RS02285 at 95.405 kb on - strand, within SGL_RS02285 at 95.407 kb on + strand, within SGL_RS02285 at 95.407 kb on + strand, within SGL_RS02285 at 95.413 kb on + strand, within SGL_RS02285 at 95.452 kb on - strand, within SGL_RS02285 at 95.462 kb on - strand, within SGL_RS02285 at 95.464 kb on + strand, within SGL_RS02285 at 95.473 kb on + strand, within SGL_RS02285 at 95.556 kb on - strand, within SGL_RS02285 at 95.697 kb on - strand, within SGL_RS02285 at 95.707 kb on - strand, within SGL_RS02285 at 95.753 kb on - strand at 95.766 kb on - strand at 95.937 kb on - strand, within SGL_RS02290 at 95.938 kb on - strand, within SGL_RS02290 at 95.975 kb on + strand, within SGL_RS02290 at 96.000 kb on + strand, within SGL_RS02290 at 96.008 kb on - strand, within SGL_RS02290 at 96.010 kb on + strand, within SGL_RS02290 at 96.078 kb on - strand, within SGL_RS02290 at 96.091 kb on - strand, within SGL_RS02290
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 92,354 + SGL_RS02275 0.87 -0.9 92,408 + -0.1 92,416 - +0.8 92,444 - +0.1 92,452 + -0.2 92,489 + +0.5 92,499 - +0.2 92,523 + -0.7 92,609 + -1.3 92,705 - -3.4 92,881 + -0.6 92,995 + +0.4 93,038 + +0.9 94,499 + SGL_RS02280 0.68 -1.5 94,704 - SGL_RS02280 0.78 -4.0 94,723 + SGL_RS02280 0.79 +0.1 94,859 + SGL_RS02280 0.85 -1.0 94,881 - SGL_RS02280 0.87 -0.7 94,907 - SGL_RS02280 0.88 -0.4 94,926 - SGL_RS02280 0.89 -0.8 95,153 + -0.2 95,339 + SGL_RS02285 0.18 -0.1 95,346 + SGL_RS02285 0.19 +0.4 95,380 + SGL_RS02285 0.25 +0.1 95,385 + SGL_RS02285 0.26 +0.2 95,397 + SGL_RS02285 0.28 +0.4 95,405 - SGL_RS02285 0.29 -0.2 95,407 + SGL_RS02285 0.30 -0.1 95,407 + SGL_RS02285 0.30 -0.5 95,413 + SGL_RS02285 0.31 +0.2 95,452 - SGL_RS02285 0.38 +0.3 95,462 - SGL_RS02285 0.39 +0.2 95,464 + SGL_RS02285 0.40 -0.2 95,473 + SGL_RS02285 0.41 +0.5 95,556 - SGL_RS02285 0.56 -0.0 95,697 - SGL_RS02285 0.80 -0.6 95,707 - SGL_RS02285 0.82 -0.1 95,753 - +0.9 95,766 - +0.5 95,937 - SGL_RS02290 0.29 +0.5 95,938 - SGL_RS02290 0.29 +0.1 95,975 + SGL_RS02290 0.38 +0.3 96,000 + SGL_RS02290 0.44 +0.2 96,008 - SGL_RS02290 0.46 -0.3 96,010 + SGL_RS02290 0.47 +0.1 96,078 - SGL_RS02290 0.63 -0.1 96,091 - SGL_RS02290 0.66 -0.6
Or see this region's nucleotide sequence