Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS00915 and SGL_RS00920 are separated by 75 nucleotides SGL_RS00920 and SGL_RS00925 are separated by 8 nucleotides
SGL_RS00915: SGL_RS00915 - TIGR02221 family CRISPR-associated protein, at 51,537 to 52,805
_RS00915
SGL_RS00920: SGL_RS00920 - hypothetical protein, at 52,881 to 53,996
_RS00920
SGL_RS00925: SGL_RS00925 - TIGR03986 family CRISPR-associated RAMP protein, at 54,005 to 56,392
_RS00925
Position (kb) 52
53
54 Strain fitness (log2 ratio) -1
0
1 at 51.974 kb on - strand, within SGL_RS00915 at 51.974 kb on - strand, within SGL_RS00915 at 51.978 kb on + strand, within SGL_RS00915 at 51.984 kb on - strand, within SGL_RS00915 at 52.042 kb on - strand, within SGL_RS00915 at 52.147 kb on + strand, within SGL_RS00915 at 52.150 kb on - strand, within SGL_RS00915 at 52.155 kb on + strand, within SGL_RS00915 at 52.165 kb on - strand, within SGL_RS00915 at 52.168 kb on + strand, within SGL_RS00915 at 52.243 kb on + strand, within SGL_RS00915 at 52.294 kb on + strand, within SGL_RS00915 at 52.347 kb on + strand, within SGL_RS00915 at 52.460 kb on + strand, within SGL_RS00915 at 52.460 kb on + strand, within SGL_RS00915 at 52.460 kb on + strand, within SGL_RS00915 at 52.467 kb on + strand, within SGL_RS00915 at 52.467 kb on + strand, within SGL_RS00915 at 52.468 kb on - strand, within SGL_RS00915 at 52.475 kb on - strand, within SGL_RS00915 at 52.521 kb on - strand, within SGL_RS00915 at 52.533 kb on - strand, within SGL_RS00915 at 52.629 kb on + strand, within SGL_RS00915 at 52.629 kb on + strand, within SGL_RS00915 at 52.788 kb on + strand at 52.985 kb on + strand at 52.985 kb on + strand at 53.024 kb on - strand, within SGL_RS00920 at 53.199 kb on - strand, within SGL_RS00920 at 53.467 kb on + strand, within SGL_RS00920 at 53.770 kb on + strand, within SGL_RS00920 at 54.121 kb on - strand at 54.411 kb on - strand, within SGL_RS00925 at 54.411 kb on - strand, within SGL_RS00925 at 54.522 kb on - strand, within SGL_RS00925 at 54.668 kb on - strand, within SGL_RS00925 at 54.792 kb on + strand, within SGL_RS00925
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 51,974 - SGL_RS00915 0.34 -0.3 51,974 - SGL_RS00915 0.34 -0.1 51,978 + SGL_RS00915 0.35 -0.1 51,984 - SGL_RS00915 0.35 +0.0 52,042 - SGL_RS00915 0.40 -0.0 52,147 + SGL_RS00915 0.48 +0.1 52,150 - SGL_RS00915 0.48 +0.1 52,155 + SGL_RS00915 0.49 +0.4 52,165 - SGL_RS00915 0.49 +0.5 52,168 + SGL_RS00915 0.50 -0.3 52,243 + SGL_RS00915 0.56 +0.4 52,294 + SGL_RS00915 0.60 -0.1 52,347 + SGL_RS00915 0.64 +0.1 52,460 + SGL_RS00915 0.73 +0.1 52,460 + SGL_RS00915 0.73 +0.6 52,460 + SGL_RS00915 0.73 -0.2 52,467 + SGL_RS00915 0.73 +0.2 52,467 + SGL_RS00915 0.73 -0.1 52,468 - SGL_RS00915 0.73 +0.1 52,475 - SGL_RS00915 0.74 -0.5 52,521 - SGL_RS00915 0.78 -0.3 52,533 - SGL_RS00915 0.78 +0.1 52,629 + SGL_RS00915 0.86 +0.5 52,629 + SGL_RS00915 0.86 +0.1 52,788 + +0.1 52,985 + -0.1 52,985 + -0.2 53,024 - SGL_RS00920 0.13 +0.2 53,199 - SGL_RS00920 0.28 +0.0 53,467 + SGL_RS00920 0.53 +0.8 53,770 + SGL_RS00920 0.80 +0.3 54,121 - -0.5 54,411 - SGL_RS00925 0.17 -0.2 54,411 - SGL_RS00925 0.17 +0.4 54,522 - SGL_RS00925 0.22 -0.0 54,668 - SGL_RS00925 0.28 +0.3 54,792 + SGL_RS00925 0.33 +0.1
Or see this region's nucleotide sequence