Experiment: D-Sorbitol 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11630 and SGL_RS11635 are separated by 91 nucleotides SGL_RS11635 and SGL_RS11640 are separated by 324 nucleotides
SGL_RS11630: SGL_RS11630 - phycobilisome linker polypeptide, at 2,067,522 to 2,068,763
_RS11630
SGL_RS11635: SGL_RS11635 - HAD family hydrolase, at 2,068,855 to 2,069,694
_RS11635
SGL_RS11640: SGL_RS11640 - tetratricopeptide repeat protein, at 2,070,019 to 2,070,891
_RS11640
Position (kb)
2068
2069
2070 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2068.891 kb on + strand at 2068.980 kb on - strand, within SGL_RS11635 at 2069.304 kb on + strand, within SGL_RS11635 at 2069.330 kb on - strand, within SGL_RS11635 at 2069.409 kb on + strand, within SGL_RS11635 at 2069.468 kb on + strand, within SGL_RS11635 at 2069.476 kb on - strand, within SGL_RS11635 at 2069.476 kb on - strand, within SGL_RS11635 at 2069.476 kb on - strand, within SGL_RS11635 at 2069.477 kb on - strand, within SGL_RS11635 at 2069.593 kb on + strand, within SGL_RS11635 at 2069.593 kb on + strand, within SGL_RS11635 at 2069.654 kb on - strand at 2069.668 kb on + strand at 2069.696 kb on + strand at 2069.819 kb on - strand at 2069.825 kb on + strand at 2070.077 kb on - strand at 2070.096 kb on - strand at 2070.169 kb on + strand, within SGL_RS11640 at 2070.170 kb on - strand, within SGL_RS11640 at 2070.312 kb on + strand, within SGL_RS11640 at 2070.312 kb on + strand, within SGL_RS11640 at 2070.328 kb on + strand, within SGL_RS11640 at 2070.354 kb on + strand, within SGL_RS11640 at 2070.362 kb on - strand, within SGL_RS11640 at 2070.362 kb on - strand, within SGL_RS11640 at 2070.543 kb on + strand, within SGL_RS11640 at 2070.627 kb on + strand, within SGL_RS11640 at 2070.690 kb on - strand, within SGL_RS11640
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol 500 mM remove 2,068,891 + -0.6 2,068,980 - SGL_RS11635 0.15 -2.2 2,069,304 + SGL_RS11635 0.53 -2.3 2,069,330 - SGL_RS11635 0.57 -2.2 2,069,409 + SGL_RS11635 0.66 -2.9 2,069,468 + SGL_RS11635 0.73 -2.4 2,069,476 - SGL_RS11635 0.74 -0.5 2,069,476 - SGL_RS11635 0.74 -1.0 2,069,476 - SGL_RS11635 0.74 -1.2 2,069,477 - SGL_RS11635 0.74 -2.7 2,069,593 + SGL_RS11635 0.88 -2.1 2,069,593 + SGL_RS11635 0.88 -3.1 2,069,654 - -2.3 2,069,668 + -2.0 2,069,696 + -2.1 2,069,819 - -0.9 2,069,825 + +2.0 2,070,077 - +0.3 2,070,096 - +0.1 2,070,169 + SGL_RS11640 0.17 +0.0 2,070,170 - SGL_RS11640 0.17 -0.3 2,070,312 + SGL_RS11640 0.34 +0.8 2,070,312 + SGL_RS11640 0.34 +0.3 2,070,328 + SGL_RS11640 0.35 -0.4 2,070,354 + SGL_RS11640 0.38 -0.5 2,070,362 - SGL_RS11640 0.39 +0.1 2,070,362 - SGL_RS11640 0.39 -2.4 2,070,543 + SGL_RS11640 0.60 +0.6 2,070,627 + SGL_RS11640 0.70 +0.6 2,070,690 - SGL_RS11640 0.77 +0.1
Or see this region's nucleotide sequence