Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS09320

Experiment: D-Sorbitol 500 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntSGL_RS09315 and SGL_RS09320 are separated by 175 nucleotidesSGL_RS09320 and SGL_RS09325 are separated by 94 nucleotides SGL_RS09315: SGL_RS09315 - TrkH family potassium uptake protein, at 1,595,285 to 1,596,619 _RS09315 SGL_RS09320: SGL_RS09320 - phosphate acyltransferase PlsX, at 1,596,795 to 1,597,841 _RS09320 SGL_RS09325: SGL_RS09325 - beta-ketoacyl-ACP synthase III, at 1,597,936 to 1,598,928 _RS09325 Position (kb) 1596 1597 1598Strain fitness (log2 ratio) -1 0 1at 1596.660 kb on - strandat 1597.786 kb on - strandat 1597.875 kb on + strandat 1597.875 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction D-Sorbitol 500 mM
remove
1,596,660 - -0.3
1,597,786 - +0.8
1,597,875 + -0.6
1,597,875 + -0.2

Or see this region's nucleotide sequence