Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS12180

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS12170 and SGL_RS12175 overlap by 14 nucleotidesSGL_RS12175 and SGL_RS12180 are separated by 200 nucleotidesSGL_RS12180 and SGL_RS12185 are separated by 0 nucleotidesSGL_RS12185 and SGL_RS12190 are separated by 247 nucleotides SGL_RS12170: SGL_RS12170 - ribosome recycling factor, at 2,192,133 to 2,192,681 _RS12170 SGL_RS12175: SGL_RS12175 - UMP kinase, at 2,192,668 to 2,193,390 _RS12175 SGL_RS12180: SGL_RS12180 - type II toxin-antitoxin system HicB family antitoxin, at 2,193,591 to 2,193,812 _RS12180 SGL_RS12185: SGL_RS12185 - type II toxin-antitoxin system HicA family toxin, at 2,193,813 to 2,194,157 _RS12185 SGL_RS12190: SGL_RS12190 - ATP-dependent chaperone ClpB, at 2,194,405 to 2,197,101 _RS12190 Position (kb) 2193 2194Strain fitness (log2 ratio) -1 0 1at 2193.657 kb on + strand, within SGL_RS12180

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Per-strain Table

Position Strand Gene LocusTag Fraction high light; bubbling
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2,193,657 + SGL_RS12180 0.30 +1.2

Or see this region's nucleotide sequence