Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS05960 and SGL_RS05965 are separated by 194 nucleotides SGL_RS05965 and SGL_RS05970 are separated by 142 nucleotides SGL_RS05970 and SGL_RS05975 are separated by 153 nucleotides
SGL_RS05960: SGL_RS05960 - chromosome segregation protein SMC, at 869,668 to 873,270
_RS05960
SGL_RS05965: SGL_RS05965 - phosphotransferase enzyme family protein, at 873,465 to 874,550
_RS05965
SGL_RS05970: SGL_RS05970 - DUF533 domain-containing protein, at 874,693 to 875,361
_RS05970
SGL_RS05975: SGL_RS05975 - DUF3531 family protein, at 875,515 to 875,979
_RS05975
Position (kb) 873
874
875 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 872.517 kb on + strand, within SGL_RS05960 at 872.604 kb on + strand, within SGL_RS05960 at 872.798 kb on - strand, within SGL_RS05960 at 872.805 kb on + strand, within SGL_RS05960 at 872.805 kb on - strand, within SGL_RS05960 at 872.810 kb on + strand, within SGL_RS05960 at 872.863 kb on + strand, within SGL_RS05960 at 872.888 kb on + strand, within SGL_RS05960 at 872.908 kb on - strand, within SGL_RS05960 at 873.044 kb on - strand at 873.182 kb on - strand at 873.182 kb on - strand at 873.285 kb on + strand at 873.492 kb on - strand at 873.580 kb on + strand, within SGL_RS05965 at 873.588 kb on - strand, within SGL_RS05965 at 873.588 kb on - strand, within SGL_RS05965 at 873.589 kb on - strand, within SGL_RS05965 at 873.665 kb on - strand, within SGL_RS05965 at 873.698 kb on + strand, within SGL_RS05965 at 873.789 kb on + strand, within SGL_RS05965 at 873.807 kb on - strand, within SGL_RS05965 at 873.878 kb on + strand, within SGL_RS05965 at 873.941 kb on - strand, within SGL_RS05965 at 873.959 kb on - strand, within SGL_RS05965 at 873.984 kb on + strand, within SGL_RS05965 at 873.997 kb on - strand, within SGL_RS05965 at 874.365 kb on - strand, within SGL_RS05965 at 874.367 kb on + strand, within SGL_RS05965 at 874.524 kb on + strand at 874.533 kb on - strand at 874.543 kb on - strand at 874.552 kb on + strand at 874.855 kb on + strand, within SGL_RS05970 at 874.973 kb on - strand, within SGL_RS05970 at 875.130 kb on - strand, within SGL_RS05970 at 875.201 kb on - strand, within SGL_RS05970 at 875.216 kb on + strand, within SGL_RS05970 at 875.341 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 872,517 + SGL_RS05960 0.79 -4.2 872,604 + SGL_RS05960 0.81 -3.0 872,798 - SGL_RS05960 0.87 -2.8 872,805 + SGL_RS05960 0.87 -3.2 872,805 - SGL_RS05960 0.87 -3.1 872,810 + SGL_RS05960 0.87 -4.6 872,863 + SGL_RS05960 0.89 -3.0 872,888 + SGL_RS05960 0.89 -3.3 872,908 - SGL_RS05960 0.90 -1.6 873,044 - -3.6 873,182 - -3.0 873,182 - -4.3 873,285 + -1.4 873,492 - -1.3 873,580 + SGL_RS05965 0.11 -0.9 873,588 - SGL_RS05965 0.11 -0.3 873,588 - SGL_RS05965 0.11 -0.9 873,589 - SGL_RS05965 0.11 +0.2 873,665 - SGL_RS05965 0.18 -0.2 873,698 + SGL_RS05965 0.21 -1.0 873,789 + SGL_RS05965 0.30 -1.5 873,807 - SGL_RS05965 0.31 +0.8 873,878 + SGL_RS05965 0.38 -2.1 873,941 - SGL_RS05965 0.44 +0.6 873,959 - SGL_RS05965 0.45 -0.7 873,984 + SGL_RS05965 0.48 -0.4 873,997 - SGL_RS05965 0.49 -0.0 874,365 - SGL_RS05965 0.83 -0.3 874,367 + SGL_RS05965 0.83 -2.1 874,524 + -0.5 874,533 - -0.4 874,543 - -0.4 874,552 + -0.1 874,855 + SGL_RS05970 0.24 -0.7 874,973 - SGL_RS05970 0.42 -1.3 875,130 - SGL_RS05970 0.65 +0.8 875,201 - SGL_RS05970 0.76 -1.4 875,216 + SGL_RS05970 0.78 -0.5 875,341 - -5.1
Or see this region's nucleotide sequence