Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03305 and SGL_RS03310 are separated by 19 nucleotides SGL_RS03310 and SGL_RS03315 are separated by 37 nucleotides
SGL_RS03305: SGL_RS03305 - CO2 hydration protein, at 305,595 to 306,824
_RS03305
SGL_RS03310: SGL_RS03310 - SUMF1/EgtB/PvdO family nonheme iron enzyme, at 306,844 to 308,076
_RS03310
SGL_RS03315: SGL_RS03315 - FAD-binding oxidoreductase, at 308,114 to 309,412
_RS03315
Position (kb) 306
307
308
309 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 306.266 kb on - strand, within SGL_RS03305 at 306.380 kb on + strand, within SGL_RS03305 at 306.393 kb on - strand, within SGL_RS03305 at 306.406 kb on + strand, within SGL_RS03305 at 306.499 kb on - strand, within SGL_RS03305 at 306.688 kb on + strand, within SGL_RS03305 at 306.696 kb on + strand, within SGL_RS03305 at 306.803 kb on + strand at 306.812 kb on - strand at 306.899 kb on + strand at 306.915 kb on - strand at 307.164 kb on + strand, within SGL_RS03310 at 307.164 kb on + strand, within SGL_RS03310 at 307.164 kb on + strand, within SGL_RS03310 at 307.174 kb on - strand, within SGL_RS03310 at 307.207 kb on + strand, within SGL_RS03310 at 307.216 kb on - strand, within SGL_RS03310 at 307.245 kb on - strand, within SGL_RS03310 at 307.433 kb on + strand, within SGL_RS03310 at 307.441 kb on - strand, within SGL_RS03310 at 307.571 kb on - strand, within SGL_RS03310 at 307.608 kb on - strand, within SGL_RS03310 at 307.670 kb on - strand, within SGL_RS03310 at 307.687 kb on - strand, within SGL_RS03310 at 307.725 kb on + strand, within SGL_RS03310 at 307.887 kb on - strand, within SGL_RS03310 at 308.000 kb on + strand at 308.265 kb on - strand, within SGL_RS03315 at 308.374 kb on - strand, within SGL_RS03315 at 308.448 kb on - strand, within SGL_RS03315 at 308.450 kb on - strand, within SGL_RS03315 at 308.455 kb on - strand, within SGL_RS03315 at 308.504 kb on + strand, within SGL_RS03315 at 308.572 kb on - strand, within SGL_RS03315 at 308.624 kb on + strand, within SGL_RS03315 at 308.631 kb on - strand, within SGL_RS03315 at 308.662 kb on - strand, within SGL_RS03315 at 308.694 kb on + strand, within SGL_RS03315 at 308.771 kb on - strand, within SGL_RS03315 at 308.953 kb on + strand, within SGL_RS03315 at 308.953 kb on + strand, within SGL_RS03315 at 308.956 kb on + strand, within SGL_RS03315 at 308.979 kb on - strand, within SGL_RS03315 at 308.985 kb on + strand, within SGL_RS03315
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 306,266 - SGL_RS03305 0.55 +5.0 306,380 + SGL_RS03305 0.64 +5.0 306,393 - SGL_RS03305 0.65 +5.0 306,406 + SGL_RS03305 0.66 +4.7 306,499 - SGL_RS03305 0.73 +3.9 306,688 + SGL_RS03305 0.89 +4.7 306,696 + SGL_RS03305 0.90 +4.6 306,803 + +1.0 306,812 - +3.3 306,899 + +1.4 306,915 - +2.9 307,164 + SGL_RS03310 0.26 +3.0 307,164 + SGL_RS03310 0.26 +2.5 307,164 + SGL_RS03310 0.26 +2.1 307,174 - SGL_RS03310 0.27 +2.0 307,207 + SGL_RS03310 0.29 +1.5 307,216 - SGL_RS03310 0.30 +1.3 307,245 - SGL_RS03310 0.33 +1.8 307,433 + SGL_RS03310 0.48 +0.4 307,441 - SGL_RS03310 0.48 +1.5 307,571 - SGL_RS03310 0.59 +2.1 307,608 - SGL_RS03310 0.62 +1.8 307,670 - SGL_RS03310 0.67 +2.6 307,687 - SGL_RS03310 0.68 +2.0 307,725 + SGL_RS03310 0.71 +1.6 307,887 - SGL_RS03310 0.85 +0.5 308,000 + +3.6 308,265 - SGL_RS03315 0.12 -1.5 308,374 - SGL_RS03315 0.20 -3.3 308,448 - SGL_RS03315 0.26 -0.4 308,450 - SGL_RS03315 0.26 -1.9 308,455 - SGL_RS03315 0.26 -0.7 308,504 + SGL_RS03315 0.30 -1.0 308,572 - SGL_RS03315 0.35 -0.2 308,624 + SGL_RS03315 0.39 -0.3 308,631 - SGL_RS03315 0.40 -2.1 308,662 - SGL_RS03315 0.42 -0.4 308,694 + SGL_RS03315 0.45 -2.3 308,771 - SGL_RS03315 0.51 -3.0 308,953 + SGL_RS03315 0.65 -1.0 308,953 + SGL_RS03315 0.65 +0.1 308,956 + SGL_RS03315 0.65 -0.6 308,979 - SGL_RS03315 0.67 -0.8 308,985 + SGL_RS03315 0.67 -0.7
Or see this region's nucleotide sequence