Experiment: medium light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02280 and SGL_RS02285 are separated by 83 nucleotides SGL_RS02285 and SGL_RS02290 are separated by 9 nucleotides SGL_RS02290 and SGL_RS02295 are separated by 96 nucleotides
SGL_RS02280: SGL_RS02280 - Rne/Rng family ribonuclease, at 93,128 to 95,152
_RS02280
SGL_RS02285: SGL_RS02285 - ribonuclease HII, at 95,236 to 95,808
_RS02285
SGL_RS02290: SGL_RS02290 - 8-oxo-dGTP diphosphatase MutT, at 95,818 to 96,228
_RS02290
SGL_RS02295: SGL_RS02295 - polyribonucleotide nucleotidyltransferase, at 96,325 to 98,481
_RS02295
Position (kb) 95
96
97 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 94.859 kb on + strand, within SGL_RS02280 at 94.881 kb on - strand, within SGL_RS02280 at 94.907 kb on - strand, within SGL_RS02280 at 94.926 kb on - strand, within SGL_RS02280 at 95.153 kb on + strand at 95.339 kb on + strand, within SGL_RS02285 at 95.346 kb on + strand, within SGL_RS02285 at 95.380 kb on + strand, within SGL_RS02285 at 95.385 kb on + strand, within SGL_RS02285 at 95.397 kb on + strand, within SGL_RS02285 at 95.405 kb on - strand, within SGL_RS02285 at 95.407 kb on + strand, within SGL_RS02285 at 95.407 kb on + strand, within SGL_RS02285 at 95.413 kb on + strand, within SGL_RS02285 at 95.452 kb on - strand, within SGL_RS02285 at 95.462 kb on - strand, within SGL_RS02285 at 95.464 kb on + strand, within SGL_RS02285 at 95.473 kb on + strand, within SGL_RS02285 at 95.556 kb on - strand, within SGL_RS02285 at 95.697 kb on - strand, within SGL_RS02285 at 95.707 kb on - strand, within SGL_RS02285 at 95.753 kb on - strand at 95.766 kb on - strand at 95.937 kb on - strand, within SGL_RS02290 at 95.938 kb on - strand, within SGL_RS02290 at 95.975 kb on + strand, within SGL_RS02290 at 96.000 kb on + strand, within SGL_RS02290 at 96.008 kb on - strand, within SGL_RS02290 at 96.010 kb on + strand, within SGL_RS02290 at 96.078 kb on - strand, within SGL_RS02290 at 96.091 kb on - strand, within SGL_RS02290 at 96.224 kb on + strand at 96.310 kb on + strand at 96.322 kb on + strand at 96.347 kb on - strand at 96.349 kb on + strand at 97.219 kb on + strand, within SGL_RS02295
Per-strain Table
Position Strand Gene LocusTag Fraction medium light; bubbling remove 94,859 + SGL_RS02280 0.85 +0.9 94,881 - SGL_RS02280 0.87 +2.8 94,907 - SGL_RS02280 0.88 +4.1 94,926 - SGL_RS02280 0.89 +2.6 95,153 + +2.2 95,339 + SGL_RS02285 0.18 -1.2 95,346 + SGL_RS02285 0.19 +0.7 95,380 + SGL_RS02285 0.25 +0.0 95,385 + SGL_RS02285 0.26 +0.3 95,397 + SGL_RS02285 0.28 -0.4 95,405 - SGL_RS02285 0.29 +0.4 95,407 + SGL_RS02285 0.30 +1.1 95,407 + SGL_RS02285 0.30 +1.4 95,413 + SGL_RS02285 0.31 +0.5 95,452 - SGL_RS02285 0.38 +1.2 95,462 - SGL_RS02285 0.39 -1.1 95,464 + SGL_RS02285 0.40 +0.6 95,473 + SGL_RS02285 0.41 -0.2 95,556 - SGL_RS02285 0.56 -0.3 95,697 - SGL_RS02285 0.80 +1.3 95,707 - SGL_RS02285 0.82 -0.9 95,753 - +1.7 95,766 - +0.6 95,937 - SGL_RS02290 0.29 +0.7 95,938 - SGL_RS02290 0.29 -0.9 95,975 + SGL_RS02290 0.38 -0.4 96,000 + SGL_RS02290 0.44 -0.1 96,008 - SGL_RS02290 0.46 +0.4 96,010 + SGL_RS02290 0.47 -1.0 96,078 - SGL_RS02290 0.63 -2.5 96,091 - SGL_RS02290 0.66 -0.9 96,224 + +1.3 96,310 + -0.7 96,322 + -1.2 96,347 - -2.1 96,349 + -0.3 97,219 + SGL_RS02295 0.41 -1.1
Or see this region's nucleotide sequence