Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11280 and SGL_RS11285 are separated by 102 nucleotides SGL_RS11285 and SGL_RS11290 are separated by 101 nucleotides
SGL_RS11280: SGL_RS11280 - serine/threonine-protein kinase, at 1,991,550 to 1,993,274
_RS11280
SGL_RS11285: SGL_RS11285 - response regulator transcription factor, at 1,993,377 to 1,994,045
_RS11285
SGL_RS11290: SGL_RS11290 - phosphoenolpyruvate carboxylase, at 1,994,147 to 1,997,251
_RS11290
Position (kb)
1993
1994
1995 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5
6 at 1992.448 kb on + strand, within SGL_RS11280 at 1992.490 kb on + strand, within SGL_RS11280 at 1992.498 kb on - strand, within SGL_RS11280 at 1992.521 kb on + strand, within SGL_RS11280 at 1992.529 kb on - strand, within SGL_RS11280 at 1992.649 kb on + strand, within SGL_RS11280 at 1992.752 kb on - strand, within SGL_RS11280 at 1992.768 kb on + strand, within SGL_RS11280 at 1992.779 kb on + strand, within SGL_RS11280 at 1992.784 kb on + strand, within SGL_RS11280 at 1992.921 kb on + strand, within SGL_RS11280 at 1992.961 kb on - strand, within SGL_RS11280 at 1992.972 kb on + strand, within SGL_RS11280 at 1993.010 kb on - strand, within SGL_RS11280 at 1993.070 kb on - strand, within SGL_RS11280 at 1993.082 kb on + strand, within SGL_RS11280 at 1993.086 kb on - strand, within SGL_RS11280 at 1993.274 kb on + strand at 1993.365 kb on + strand at 1993.402 kb on + strand at 1993.464 kb on + strand, within SGL_RS11285 at 1994.046 kb on + strand at 1994.105 kb on - strand at 1994.115 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 1,992,448 + SGL_RS11280 0.52 +2.0 1,992,490 + SGL_RS11280 0.54 +3.4 1,992,498 - SGL_RS11280 0.55 +3.0 1,992,521 + SGL_RS11280 0.56 +2.6 1,992,529 - SGL_RS11280 0.57 +3.6 1,992,649 + SGL_RS11280 0.64 +2.9 1,992,752 - SGL_RS11280 0.70 +2.7 1,992,768 + SGL_RS11280 0.71 +2.0 1,992,779 + SGL_RS11280 0.71 +3.2 1,992,784 + SGL_RS11280 0.72 +2.8 1,992,921 + SGL_RS11280 0.79 +3.4 1,992,961 - SGL_RS11280 0.82 +3.4 1,992,972 + SGL_RS11280 0.82 +2.3 1,993,010 - SGL_RS11280 0.85 +3.9 1,993,070 - SGL_RS11280 0.88 +3.2 1,993,082 + SGL_RS11280 0.89 +2.9 1,993,086 - SGL_RS11280 0.89 +2.7 1,993,274 + +0.4 1,993,365 + -1.5 1,993,402 + +0.4 1,993,464 + SGL_RS11285 0.13 +1.6 1,994,046 + +1.1 1,994,105 - +6.5 1,994,115 - +1.3
Or see this region's nucleotide sequence