Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS07600 and SGL_RS07605 are separated by 52 nucleotides SGL_RS07605 and SGL_RS07610 are separated by 32 nucleotides
SGL_RS07600: SGL_RS07600 - fumarylacetoacetate hydrolase family protein, at 1,228,237 to 1,229,067
_RS07600
SGL_RS07605: SGL_RS07605 - HEAT repeat domain-containing protein, at 1,229,120 to 1,229,938
_RS07605
SGL_RS07610: SGL_RS07610 - cyclophane-forming radical SAM/SPASM peptide maturase GrrM/OscB, at 1,229,971 to 1,231,167
_RS07610
Position (kb)
1229
1230 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1228.134 kb on - strand at 1228.271 kb on - strand at 1228.281 kb on + strand at 1228.359 kb on - strand, within SGL_RS07600 at 1228.366 kb on - strand, within SGL_RS07600 at 1228.649 kb on - strand, within SGL_RS07600 at 1228.876 kb on + strand, within SGL_RS07600 at 1228.883 kb on + strand, within SGL_RS07600 at 1228.925 kb on + strand, within SGL_RS07600 at 1229.017 kb on + strand at 1229.017 kb on + strand at 1229.380 kb on + strand, within SGL_RS07605 at 1229.397 kb on + strand, within SGL_RS07605 at 1229.577 kb on + strand, within SGL_RS07605 at 1229.602 kb on - strand, within SGL_RS07605 at 1229.705 kb on + strand, within SGL_RS07605 at 1229.780 kb on + strand, within SGL_RS07605 at 1230.158 kb on + strand, within SGL_RS07610 at 1230.160 kb on - strand, within SGL_RS07610 at 1230.827 kb on - strand, within SGL_RS07610
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,228,134 - -0.1 1,228,271 - -0.1 1,228,281 + -0.3 1,228,359 - SGL_RS07600 0.15 -1.0 1,228,366 - SGL_RS07600 0.16 -0.3 1,228,649 - SGL_RS07600 0.50 -0.6 1,228,876 + SGL_RS07600 0.77 -0.7 1,228,883 + SGL_RS07600 0.78 -0.6 1,228,925 + SGL_RS07600 0.83 -0.8 1,229,017 + -0.7 1,229,017 + -0.3 1,229,380 + SGL_RS07605 0.32 -4.0 1,229,397 + SGL_RS07605 0.34 -3.2 1,229,577 + SGL_RS07605 0.56 -1.2 1,229,602 - SGL_RS07605 0.59 -2.2 1,229,705 + SGL_RS07605 0.71 -3.9 1,229,780 + SGL_RS07605 0.81 -2.4 1,230,158 + SGL_RS07610 0.16 -0.0 1,230,160 - SGL_RS07610 0.16 +0.5 1,230,827 - SGL_RS07610 0.72 +0.0
Or see this region's nucleotide sequence