Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS17050

Experiment: high light; bubbling

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS17045 and SGL_RS17050 are separated by 254 nucleotidesSGL_RS17050 and SGL_RS17055 are separated by 71 nucleotides SGL_RS17045: SGL_RS17045 - type I glyceraldehyde-3-phosphate dehydrogenase, at 3,278,122 to 3,279,135 _RS17045 SGL_RS17050: SGL_RS17050 - UDP-N-acetylmuramate--L-alanine ligase, at 3,279,390 to 3,280,907 _RS17050 SGL_RS17055: SGL_RS17055 - UDP-N-acetylmuramate dehydrogenase, at 3,280,979 to 3,281,932 _RS17055 Position (kb) 3279 3280 3281Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 3279.163 kb on - strandat 3279.263 kb on - strandat 3281.039 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction high light; bubbling
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3,279,163 - +0.6
3,279,263 - -4.9
3,281,039 + -2.7

Or see this region's nucleotide sequence