Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS16690 and SGL_RS16695 are separated by 9 nucleotides SGL_RS16695 and SGL_RS16700 are separated by 131 nucleotides SGL_RS16700 and SGL_RS16705 overlap by 4 nucleotides
SGL_RS16690: SGL_RS16690 - adenosine kinase, at 3,201,688 to 3,202,689
_RS16690
SGL_RS16695: SGL_RS16695 - magnesium/cobalt transporter CorA, at 3,202,699 to 3,203,862
_RS16695
SGL_RS16700: SGL_RS16700 - polyprenyl diphosphate synthase, at 3,203,994 to 3,204,743
_RS16700
SGL_RS16705: SGL_RS16705 - diadenylate cyclase CdaA, at 3,204,740 to 3,205,651
_RS16705
Position (kb) 3202
3203
3204 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 3201.752 kb on + strand at 3201.849 kb on - strand, within SGL_RS16690 at 3201.849 kb on - strand, within SGL_RS16690 at 3201.886 kb on + strand, within SGL_RS16690 at 3201.914 kb on - strand, within SGL_RS16690 at 3202.436 kb on - strand, within SGL_RS16690 at 3202.495 kb on + strand, within SGL_RS16690 at 3202.553 kb on + strand, within SGL_RS16690 at 3202.561 kb on - strand, within SGL_RS16690 at 3202.633 kb on - strand at 3202.840 kb on + strand, within SGL_RS16695 at 3203.402 kb on + strand, within SGL_RS16695 at 3203.409 kb on + strand, within SGL_RS16695 at 3203.584 kb on + strand, within SGL_RS16695 at 3203.592 kb on - strand, within SGL_RS16695 at 3203.734 kb on + strand, within SGL_RS16695 at 3203.737 kb on - strand, within SGL_RS16695 at 3203.770 kb on - strand at 3203.786 kb on + strand at 3203.928 kb on - strand at 3203.992 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 3,201,752 + -3.3 3,201,849 - SGL_RS16690 0.16 +0.4 3,201,849 - SGL_RS16690 0.16 -3.3 3,201,886 + SGL_RS16690 0.20 -3.7 3,201,914 - SGL_RS16690 0.23 -1.3 3,202,436 - SGL_RS16690 0.75 +1.0 3,202,495 + SGL_RS16690 0.81 -0.2 3,202,553 + SGL_RS16690 0.86 -1.9 3,202,561 - SGL_RS16690 0.87 -0.4 3,202,633 - -3.7 3,202,840 + SGL_RS16695 0.12 -3.8 3,203,402 + SGL_RS16695 0.60 -2.9 3,203,409 + SGL_RS16695 0.61 -3.9 3,203,584 + SGL_RS16695 0.76 -3.7 3,203,592 - SGL_RS16695 0.77 -1.6 3,203,734 + SGL_RS16695 0.89 -2.0 3,203,737 - SGL_RS16695 0.89 -4.0 3,203,770 - -4.0 3,203,786 + -1.0 3,203,928 - +0.8 3,203,992 + -0.2
Or see this region's nucleotide sequence