Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14195 and SGL_RS14200 are separated by 81 nucleotides SGL_RS14200 and SGL_RS14205 are separated by 321 nucleotides
SGL_RS14195: SGL_RS14195 - phosphate ABC transporter permease subunit PstC, at 2,639,627 to 2,640,580
_RS14195
SGL_RS14200: SGL_RS14200 - phosphate ABC transporter substrate-binding protein PstS, at 2,640,662 to 2,641,813
_RS14200
SGL_RS14205: SGL_RS14205 - PstS family phosphate ABC transporter substrate-binding protein, at 2,642,135 to 2,643,145
_RS14205
Position (kb)
2640
2641
2642 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7
8
9
10
11
12 at 2639.698 kb on + strand at 2639.714 kb on + strand at 2639.883 kb on - strand, within SGL_RS14195 at 2640.084 kb on + strand, within SGL_RS14195 at 2640.188 kb on + strand, within SGL_RS14195 at 2640.434 kb on + strand, within SGL_RS14195 at 2640.474 kb on - strand, within SGL_RS14195 at 2640.938 kb on + strand, within SGL_RS14200 at 2641.034 kb on + strand, within SGL_RS14200 at 2641.069 kb on + strand, within SGL_RS14200 at 2641.095 kb on - strand, within SGL_RS14200 at 2641.355 kb on + strand, within SGL_RS14200 at 2641.355 kb on + strand, within SGL_RS14200 at 2641.362 kb on - strand, within SGL_RS14200 at 2641.362 kb on - strand, within SGL_RS14200 at 2641.379 kb on + strand, within SGL_RS14200 at 2641.385 kb on + strand, within SGL_RS14200 at 2641.387 kb on - strand, within SGL_RS14200 at 2641.398 kb on - strand, within SGL_RS14200 at 2641.400 kb on + strand, within SGL_RS14200 at 2641.457 kb on + strand, within SGL_RS14200 at 2641.533 kb on + strand, within SGL_RS14200 at 2641.584 kb on - strand, within SGL_RS14200 at 2641.633 kb on - strand, within SGL_RS14200 at 2641.688 kb on + strand, within SGL_RS14200 at 2641.698 kb on + strand at 2641.698 kb on + strand at 2641.706 kb on - strand at 2641.761 kb on - strand at 2641.890 kb on - strand at 2642.198 kb on + strand at 2642.246 kb on + strand, within SGL_RS14205 at 2642.246 kb on + strand, within SGL_RS14205 at 2642.246 kb on + strand, within SGL_RS14205 at 2642.340 kb on + strand, within SGL_RS14205 at 2642.442 kb on + strand, within SGL_RS14205 at 2642.528 kb on - strand, within SGL_RS14205 at 2642.652 kb on + strand, within SGL_RS14205 at 2642.655 kb on + strand, within SGL_RS14205 at 2642.800 kb on + strand, within SGL_RS14205 at 2642.808 kb on - strand, within SGL_RS14205
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 2,639,698 + +7.7 2,639,714 + +8.4 2,639,883 - SGL_RS14195 0.27 +6.8 2,640,084 + SGL_RS14195 0.48 +8.1 2,640,188 + SGL_RS14195 0.59 +7.6 2,640,434 + SGL_RS14195 0.85 +6.6 2,640,474 - SGL_RS14195 0.89 +7.4 2,640,938 + SGL_RS14200 0.24 +9.2 2,641,034 + SGL_RS14200 0.32 +8.7 2,641,069 + SGL_RS14200 0.35 +10.6 2,641,095 - SGL_RS14200 0.38 +8.4 2,641,355 + SGL_RS14200 0.60 +10.3 2,641,355 + SGL_RS14200 0.60 +11.5 2,641,362 - SGL_RS14200 0.61 +9.0 2,641,362 - SGL_RS14200 0.61 +8.6 2,641,379 + SGL_RS14200 0.62 +12.6 2,641,385 + SGL_RS14200 0.63 +10.0 2,641,387 - SGL_RS14200 0.63 +10.0 2,641,398 - SGL_RS14200 0.64 +8.2 2,641,400 + SGL_RS14200 0.64 +9.7 2,641,457 + SGL_RS14200 0.69 +9.8 2,641,533 + SGL_RS14200 0.76 +9.7 2,641,584 - SGL_RS14200 0.80 +7.5 2,641,633 - SGL_RS14200 0.84 +11.8 2,641,688 + SGL_RS14200 0.89 +10.2 2,641,698 + +10.9 2,641,698 + +9.4 2,641,706 - +8.7 2,641,761 - +7.3 2,641,890 - +6.0 2,642,198 + +0.2 2,642,246 + SGL_RS14205 0.11 +1.3 2,642,246 + SGL_RS14205 0.11 +0.3 2,642,246 + SGL_RS14205 0.11 +0.2 2,642,340 + SGL_RS14205 0.20 +0.6 2,642,442 + SGL_RS14205 0.30 +0.1 2,642,528 - SGL_RS14205 0.39 -0.3 2,642,652 + SGL_RS14205 0.51 -2.0 2,642,655 + SGL_RS14205 0.51 -0.6 2,642,800 + SGL_RS14205 0.66 -1.4 2,642,808 - SGL_RS14205 0.67 -0.5
Or see this region's nucleotide sequence