Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS13490 and SGL_RS13495 are separated by 103 nucleotides SGL_RS13495 and SGL_RS13500 are separated by 187 nucleotides
SGL_RS13490: SGL_RS13490 - aspartate aminotransferase, at 2,494,205 to 2,495,389
_RS13490
SGL_RS13495: SGL_RS13495 - AarF/ABC1/UbiB kinase family protein, at 2,495,493 to 2,497,538
_RS13495
SGL_RS13500: SGL_RS13500 - ATP-dependent DNA helicase RecG, at 2,497,726 to 2,500,221
_RS13500
Position (kb)
2495
2496
2497
2498 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2494.757 kb on + strand, within SGL_RS13490 at 2495.050 kb on - strand, within SGL_RS13490 at 2495.050 kb on - strand, within SGL_RS13490 at 2495.050 kb on - strand, within SGL_RS13490 at 2495.056 kb on + strand, within SGL_RS13490 at 2495.350 kb on - strand at 2495.436 kb on + strand at 2495.436 kb on + strand at 2495.550 kb on - strand at 2495.667 kb on - strand at 2495.669 kb on + strand at 2495.677 kb on - strand at 2495.785 kb on + strand, within SGL_RS13495 at 2495.793 kb on - strand, within SGL_RS13495 at 2495.793 kb on - strand, within SGL_RS13495 at 2496.080 kb on + strand, within SGL_RS13495 at 2496.317 kb on + strand, within SGL_RS13495 at 2496.384 kb on - strand, within SGL_RS13495 at 2496.440 kb on - strand, within SGL_RS13495 at 2496.466 kb on - strand, within SGL_RS13495 at 2496.647 kb on + strand, within SGL_RS13495 at 2496.743 kb on - strand, within SGL_RS13495 at 2496.815 kb on - strand, within SGL_RS13495 at 2496.865 kb on + strand, within SGL_RS13495 at 2496.928 kb on - strand, within SGL_RS13495 at 2496.978 kb on - strand, within SGL_RS13495 at 2496.982 kb on + strand, within SGL_RS13495 at 2496.983 kb on + strand, within SGL_RS13495 at 2497.074 kb on + strand, within SGL_RS13495 at 2497.652 kb on - strand at 2497.695 kb on + strand at 2497.726 kb on + strand at 2497.980 kb on + strand, within SGL_RS13500 at 2498.089 kb on + strand, within SGL_RS13500 at 2498.117 kb on + strand, within SGL_RS13500 at 2498.304 kb on - strand, within SGL_RS13500 at 2498.331 kb on - strand, within SGL_RS13500
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 2,494,757 + SGL_RS13490 0.47 -3.0 2,495,050 - SGL_RS13490 0.71 +1.3 2,495,050 - SGL_RS13490 0.71 -0.4 2,495,050 - SGL_RS13490 0.71 -2.4 2,495,056 + SGL_RS13490 0.72 -2.7 2,495,350 - -0.7 2,495,436 + -1.0 2,495,436 + -1.0 2,495,550 - -1.1 2,495,667 - -3.8 2,495,669 + -2.7 2,495,677 - -2.7 2,495,785 + SGL_RS13495 0.14 -2.5 2,495,793 - SGL_RS13495 0.15 -2.6 2,495,793 - SGL_RS13495 0.15 -0.8 2,496,080 + SGL_RS13495 0.29 -1.4 2,496,317 + SGL_RS13495 0.40 -3.0 2,496,384 - SGL_RS13495 0.44 -3.7 2,496,440 - SGL_RS13495 0.46 -3.4 2,496,466 - SGL_RS13495 0.48 -3.8 2,496,647 + SGL_RS13495 0.56 -1.8 2,496,743 - SGL_RS13495 0.61 -1.4 2,496,815 - SGL_RS13495 0.65 -3.3 2,496,865 + SGL_RS13495 0.67 -3.0 2,496,928 - SGL_RS13495 0.70 -1.9 2,496,978 - SGL_RS13495 0.73 -2.1 2,496,982 + SGL_RS13495 0.73 -2.0 2,496,983 + SGL_RS13495 0.73 -1.2 2,497,074 + SGL_RS13495 0.77 -1.5 2,497,652 - -4.0 2,497,695 + -1.4 2,497,726 + -0.5 2,497,980 + SGL_RS13500 0.10 -4.0 2,498,089 + SGL_RS13500 0.15 -2.9 2,498,117 + SGL_RS13500 0.16 -1.3 2,498,304 - SGL_RS13500 0.23 -2.6 2,498,331 - SGL_RS13500 0.24 -1.7
Or see this region's nucleotide sequence