Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11480 and SGL_RS11485 are separated by 170 nucleotides SGL_RS11485 and SGL_RS11490 are separated by 263 nucleotides SGL_RS11490 and SGL_RS11495 are separated by 41 nucleotides
SGL_RS11480: SGL_RS11480 - glycosyltransferase, at 2,032,951 to 2,034,123
_RS11480
SGL_RS11485: SGL_RS11485 - inorganic diphosphatase, at 2,034,294 to 2,034,803
_RS11485
SGL_RS11490: SGL_RS11490 - NAD(P)H-quinone oxidoreductase subunit M, at 2,035,067 to 2,035,432
_RS11490
SGL_RS11495: SGL_RS11495 - Ig-like domain-containing protein, at 2,035,474 to 2,036,850
_RS11495
Position (kb)
2034
2035 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2033.302 kb on + strand, within SGL_RS11480 at 2033.409 kb on - strand, within SGL_RS11480 at 2033.487 kb on - strand, within SGL_RS11480 at 2033.514 kb on + strand, within SGL_RS11480 at 2033.514 kb on + strand, within SGL_RS11480 at 2033.522 kb on - strand, within SGL_RS11480 at 2033.623 kb on + strand, within SGL_RS11480 at 2033.670 kb on - strand, within SGL_RS11480 at 2033.752 kb on + strand, within SGL_RS11480 at 2033.945 kb on + strand, within SGL_RS11480 at 2034.066 kb on + strand at 2034.089 kb on - strand at 2034.154 kb on + strand at 2034.206 kb on + strand at 2034.216 kb on - strand at 2034.772 kb on + strand at 2034.819 kb on + strand at 2034.905 kb on - strand at 2035.464 kb on + strand at 2035.464 kb on + strand at 2035.472 kb on - strand at 2035.472 kb on - strand at 2035.472 kb on - strand at 2035.474 kb on + strand at 2035.530 kb on + strand at 2035.538 kb on - strand at 2035.543 kb on - strand at 2035.547 kb on + strand at 2035.687 kb on + strand, within SGL_RS11495 at 2035.708 kb on - strand, within SGL_RS11495
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 2,033,302 + SGL_RS11480 0.30 -1.6 2,033,409 - SGL_RS11480 0.39 +0.1 2,033,487 - SGL_RS11480 0.46 -0.4 2,033,514 + SGL_RS11480 0.48 -0.4 2,033,514 + SGL_RS11480 0.48 -0.1 2,033,522 - SGL_RS11480 0.49 -1.2 2,033,623 + SGL_RS11480 0.57 -0.2 2,033,670 - SGL_RS11480 0.61 -1.5 2,033,752 + SGL_RS11480 0.68 -0.5 2,033,945 + SGL_RS11480 0.85 -1.2 2,034,066 + -0.8 2,034,089 - +0.2 2,034,154 + -0.8 2,034,206 + +3.2 2,034,216 - -0.4 2,034,772 + +1.0 2,034,819 + -0.0 2,034,905 - -0.1 2,035,464 + -0.3 2,035,464 + -2.0 2,035,472 - -0.1 2,035,472 - -2.1 2,035,472 - -1.3 2,035,474 + -2.3 2,035,530 + -3.4 2,035,538 - +0.1 2,035,543 - -2.7 2,035,547 + -2.7 2,035,687 + SGL_RS11495 0.15 -1.7 2,035,708 - SGL_RS11495 0.17 -2.7
Or see this region's nucleotide sequence