Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06375 and SGL_RS06380 are separated by 157 nucleotides SGL_RS06380 and SGL_RS06385 are separated by 137 nucleotides
SGL_RS06375: SGL_RS06375 - glucose-6-phosphate dehydrogenase, at 961,201 to 962,730
_RS06375
SGL_RS06380: SGL_RS06380 - excinuclease ABC subunit UvrA, at 962,888 to 965,800
_RS06380
SGL_RS06385: SGL_RS06385 - hypothetical protein, at 965,938 to 967,473
_RS06385
Position (kb) 962
963
964
965
966 Strain fitness (log2 ratio) -2
-1
0
1
2 at 961.913 kb on + strand, within SGL_RS06375 at 961.913 kb on + strand, within SGL_RS06375 at 961.966 kb on + strand, within SGL_RS06375 at 962.010 kb on - strand, within SGL_RS06375 at 962.270 kb on + strand, within SGL_RS06375 at 962.272 kb on + strand, within SGL_RS06375 at 962.379 kb on - strand, within SGL_RS06375 at 962.435 kb on + strand, within SGL_RS06375 at 962.742 kb on + strand at 963.069 kb on + strand at 963.105 kb on + strand at 963.118 kb on - strand at 963.634 kb on - strand, within SGL_RS06380 at 963.728 kb on + strand, within SGL_RS06380 at 963.746 kb on - strand, within SGL_RS06380 at 963.948 kb on + strand, within SGL_RS06380 at 964.250 kb on - strand, within SGL_RS06380 at 964.534 kb on + strand, within SGL_RS06380 at 964.578 kb on - strand, within SGL_RS06380 at 964.591 kb on - strand, within SGL_RS06380 at 964.612 kb on + strand, within SGL_RS06380 at 964.748 kb on + strand, within SGL_RS06380 at 964.756 kb on - strand, within SGL_RS06380 at 964.808 kb on + strand, within SGL_RS06380 at 964.825 kb on - strand, within SGL_RS06380 at 964.924 kb on - strand, within SGL_RS06380 at 964.951 kb on + strand, within SGL_RS06380 at 965.073 kb on - strand, within SGL_RS06380 at 965.213 kb on - strand, within SGL_RS06380 at 965.246 kb on + strand, within SGL_RS06380 at 965.297 kb on + strand, within SGL_RS06380 at 965.308 kb on + strand, within SGL_RS06380 at 965.433 kb on - strand, within SGL_RS06380 at 965.463 kb on - strand, within SGL_RS06380 at 965.611 kb on - strand at 965.731 kb on + strand at 965.973 kb on - strand at 965.986 kb on + strand at 966.194 kb on - strand, within SGL_RS06385 at 966.276 kb on + strand, within SGL_RS06385 at 966.411 kb on - strand, within SGL_RS06385 at 966.583 kb on + strand, within SGL_RS06385 at 966.589 kb on - strand, within SGL_RS06385 at 966.683 kb on + strand, within SGL_RS06385 at 966.691 kb on - strand, within SGL_RS06385 at 966.698 kb on - strand, within SGL_RS06385 at 966.715 kb on + strand, within SGL_RS06385 at 966.718 kb on + strand, within SGL_RS06385 at 966.726 kb on - strand, within SGL_RS06385 at 966.735 kb on - strand, within SGL_RS06385 at 966.798 kb on - strand, within SGL_RS06385
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 961,913 + SGL_RS06375 0.47 +0.4 961,913 + SGL_RS06375 0.47 -0.2 961,966 + SGL_RS06375 0.50 -0.6 962,010 - SGL_RS06375 0.53 -1.3 962,270 + SGL_RS06375 0.70 -0.3 962,272 + SGL_RS06375 0.70 -2.2 962,379 - SGL_RS06375 0.77 -1.1 962,435 + SGL_RS06375 0.81 -1.6 962,742 + +0.4 963,069 + +2.3 963,105 + +1.4 963,118 - +1.3 963,634 - SGL_RS06380 0.26 +1.8 963,728 + SGL_RS06380 0.29 +2.3 963,746 - SGL_RS06380 0.29 +2.6 963,948 + SGL_RS06380 0.36 +1.7 964,250 - SGL_RS06380 0.47 +2.4 964,534 + SGL_RS06380 0.57 +1.2 964,578 - SGL_RS06380 0.58 +0.8 964,591 - SGL_RS06380 0.58 +1.2 964,612 + SGL_RS06380 0.59 +1.4 964,748 + SGL_RS06380 0.64 +1.8 964,756 - SGL_RS06380 0.64 +2.3 964,808 + SGL_RS06380 0.66 +2.5 964,825 - SGL_RS06380 0.66 +1.1 964,924 - SGL_RS06380 0.70 +1.8 964,951 + SGL_RS06380 0.71 +2.7 965,073 - SGL_RS06380 0.75 +1.6 965,213 - SGL_RS06380 0.80 +1.8 965,246 + SGL_RS06380 0.81 +1.6 965,297 + SGL_RS06380 0.83 +1.4 965,308 + SGL_RS06380 0.83 -0.0 965,433 - SGL_RS06380 0.87 +0.8 965,463 - SGL_RS06380 0.88 +1.9 965,611 - -0.0 965,731 + +1.7 965,973 - +0.1 965,986 + +1.0 966,194 - SGL_RS06385 0.17 -0.2 966,276 + SGL_RS06385 0.22 -0.1 966,411 - SGL_RS06385 0.31 +0.4 966,583 + SGL_RS06385 0.42 +1.7 966,589 - SGL_RS06385 0.42 -0.5 966,683 + SGL_RS06385 0.49 +0.5 966,691 - SGL_RS06385 0.49 -0.1 966,698 - SGL_RS06385 0.49 -0.4 966,715 + SGL_RS06385 0.51 +0.4 966,718 + SGL_RS06385 0.51 -0.1 966,726 - SGL_RS06385 0.51 -1.1 966,735 - SGL_RS06385 0.52 +0.1 966,798 - SGL_RS06385 0.56 +1.9
Or see this region's nucleotide sequence