Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS05310 and SGL_RS05315 are separated by 100 nucleotides SGL_RS05315 and SGL_RS05320 are separated by 68 nucleotides SGL_RS05320 and SGL_RS05325 are separated by 148 nucleotides SGL_RS05325 and SGL_RS05330 are separated by 91 nucleotides
SGL_RS05310: SGL_RS05310 - hypothetical protein, at 737,867 to 738,808
_RS05310
SGL_RS05315: SGL_RS05315 - hypothetical protein, at 738,909 to 739,613
_RS05315
SGL_RS05320: SGL_RS05320 - PBP1A family penicillin-binding protein, at 739,682 to 741,931
_RS05320
SGL_RS05325: SGL_RS05325 - PAP/fibrillin family protein, at 742,080 to 742,688
_RS05325
SGL_RS05330: SGL_RS05330 - ABC transporter ATP-binding protein, at 742,780 to 744,732
_RS05330
Position (kb) 739
740
741
742 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 738.714 kb on + strand at 738.735 kb on + strand at 738.762 kb on - strand at 738.944 kb on + strand at 738.964 kb on - strand at 738.985 kb on + strand, within SGL_RS05315 at 739.036 kb on - strand, within SGL_RS05315 at 739.183 kb on + strand, within SGL_RS05315 at 739.193 kb on + strand, within SGL_RS05315 at 739.217 kb on + strand, within SGL_RS05315 at 739.368 kb on - strand, within SGL_RS05315 at 739.448 kb on - strand, within SGL_RS05315 at 739.483 kb on + strand, within SGL_RS05315 at 739.521 kb on + strand, within SGL_RS05315 at 739.529 kb on - strand, within SGL_RS05315 at 739.530 kb on + strand, within SGL_RS05315 at 739.760 kb on + strand at 739.921 kb on + strand, within SGL_RS05320 at 739.944 kb on + strand, within SGL_RS05320 at 740.108 kb on + strand, within SGL_RS05320 at 740.236 kb on - strand, within SGL_RS05320 at 740.405 kb on + strand, within SGL_RS05320 at 740.405 kb on + strand, within SGL_RS05320 at 740.409 kb on - strand, within SGL_RS05320 at 740.413 kb on - strand, within SGL_RS05320 at 740.466 kb on + strand, within SGL_RS05320 at 740.474 kb on - strand, within SGL_RS05320 at 740.507 kb on - strand, within SGL_RS05320 at 740.637 kb on + strand, within SGL_RS05320 at 740.714 kb on - strand, within SGL_RS05320 at 740.756 kb on + strand, within SGL_RS05320 at 740.871 kb on + strand, within SGL_RS05320 at 740.873 kb on - strand, within SGL_RS05320 at 740.873 kb on - strand, within SGL_RS05320 at 740.873 kb on - strand, within SGL_RS05320 at 740.876 kb on + strand, within SGL_RS05320 at 741.086 kb on - strand, within SGL_RS05320 at 741.374 kb on - strand, within SGL_RS05320 at 741.507 kb on - strand, within SGL_RS05320 at 741.562 kb on + strand, within SGL_RS05320 at 741.562 kb on + strand, within SGL_RS05320 at 741.590 kb on - strand, within SGL_RS05320 at 741.625 kb on + strand, within SGL_RS05320 at 741.907 kb on - strand at 741.973 kb on - strand at 742.043 kb on - strand at 742.095 kb on + strand at 742.176 kb on - strand, within SGL_RS05325 at 742.217 kb on - strand, within SGL_RS05325 at 742.275 kb on + strand, within SGL_RS05325 at 742.397 kb on + strand, within SGL_RS05325 at 742.405 kb on - strand, within SGL_RS05325 at 742.464 kb on + strand, within SGL_RS05325 at 742.486 kb on + strand, within SGL_RS05325 at 742.554 kb on - strand, within SGL_RS05325 at 742.678 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 738,714 + +1.5 738,735 + +0.3 738,762 - +0.7 738,944 + -1.5 738,964 - -3.6 738,985 + SGL_RS05315 0.11 -0.7 739,036 - SGL_RS05315 0.18 -2.1 739,183 + SGL_RS05315 0.39 -0.3 739,193 + SGL_RS05315 0.40 +0.4 739,217 + SGL_RS05315 0.44 -0.8 739,368 - SGL_RS05315 0.65 -0.4 739,448 - SGL_RS05315 0.76 +0.1 739,483 + SGL_RS05315 0.81 -1.7 739,521 + SGL_RS05315 0.87 +0.4 739,529 - SGL_RS05315 0.88 -0.1 739,530 + SGL_RS05315 0.88 -2.0 739,760 + -1.6 739,921 + SGL_RS05320 0.11 -2.8 739,944 + SGL_RS05320 0.12 -3.9 740,108 + SGL_RS05320 0.19 -5.3 740,236 - SGL_RS05320 0.25 -3.7 740,405 + SGL_RS05320 0.32 -0.9 740,405 + SGL_RS05320 0.32 -0.8 740,409 - SGL_RS05320 0.32 -2.3 740,413 - SGL_RS05320 0.32 -2.9 740,466 + SGL_RS05320 0.35 -3.3 740,474 - SGL_RS05320 0.35 -4.7 740,507 - SGL_RS05320 0.37 -1.9 740,637 + SGL_RS05320 0.42 -2.9 740,714 - SGL_RS05320 0.46 -3.0 740,756 + SGL_RS05320 0.48 -0.8 740,871 + SGL_RS05320 0.53 -2.0 740,873 - SGL_RS05320 0.53 -2.1 740,873 - SGL_RS05320 0.53 -2.2 740,873 - SGL_RS05320 0.53 -2.0 740,876 + SGL_RS05320 0.53 -2.6 741,086 - SGL_RS05320 0.62 -0.4 741,374 - SGL_RS05320 0.75 -2.2 741,507 - SGL_RS05320 0.81 -1.9 741,562 + SGL_RS05320 0.84 -2.4 741,562 + SGL_RS05320 0.84 -1.0 741,590 - SGL_RS05320 0.85 -0.7 741,625 + SGL_RS05320 0.86 +1.9 741,907 - -1.6 741,973 - -0.2 742,043 - -0.3 742,095 + -1.5 742,176 - SGL_RS05325 0.16 -2.2 742,217 - SGL_RS05325 0.22 -1.9 742,275 + SGL_RS05325 0.32 -0.9 742,397 + SGL_RS05325 0.52 -2.0 742,405 - SGL_RS05325 0.53 -1.5 742,464 + SGL_RS05325 0.63 -1.5 742,486 + SGL_RS05325 0.67 +1.3 742,554 - SGL_RS05325 0.78 -0.7 742,678 + -0.4
Or see this region's nucleotide sequence