Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS04255 and SGL_RS04260 are separated by 88 nucleotides SGL_RS04260 and SGL_RS04265 are separated by 92 nucleotides SGL_RS04265 and SGL_RS04275 are separated by 487 nucleotides
SGL_RS04255: SGL_RS04255 - tetratricopeptide repeat protein, at 504,755 to 505,267
_RS04255
SGL_RS04260: SGL_RS04260 - DUF2993 domain-containing protein, at 505,356 to 506,159
_RS04260
SGL_RS04265: SGL_RS04265 - calcium-binding protein, at 506,252 to 508,027
_RS04265
SGL_RS04275: SGL_RS04275 - magnesium chelatase subunit H, at 508,515 to 512,510
_RS04275
Position (kb) 506
507
508
509 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 505.343 kb on + strand at 505.435 kb on - strand at 505.507 kb on + strand, within SGL_RS04260 at 505.507 kb on + strand, within SGL_RS04260 at 505.515 kb on - strand, within SGL_RS04260 at 505.571 kb on - strand, within SGL_RS04260 at 505.665 kb on + strand, within SGL_RS04260 at 505.665 kb on + strand, within SGL_RS04260 at 505.665 kb on + strand, within SGL_RS04260 at 505.680 kb on + strand, within SGL_RS04260 at 505.698 kb on + strand, within SGL_RS04260 at 505.782 kb on - strand, within SGL_RS04260 at 505.786 kb on + strand, within SGL_RS04260 at 505.809 kb on - strand, within SGL_RS04260 at 505.886 kb on - strand, within SGL_RS04260 at 506.093 kb on + strand at 506.223 kb on + strand at 506.311 kb on - strand at 506.410 kb on - strand at 506.456 kb on - strand, within SGL_RS04265 at 506.458 kb on + strand, within SGL_RS04265 at 506.499 kb on - strand, within SGL_RS04265 at 506.815 kb on + strand, within SGL_RS04265 at 506.896 kb on - strand, within SGL_RS04265 at 506.910 kb on + strand, within SGL_RS04265 at 507.136 kb on - strand, within SGL_RS04265 at 507.276 kb on + strand, within SGL_RS04265 at 507.302 kb on - strand, within SGL_RS04265 at 507.399 kb on + strand, within SGL_RS04265 at 507.685 kb on + strand, within SGL_RS04265 at 507.693 kb on - strand, within SGL_RS04265 at 507.699 kb on + strand, within SGL_RS04265 at 507.715 kb on + strand, within SGL_RS04265 at 507.963 kb on - strand at 508.126 kb on - strand at 508.136 kb on - strand at 508.182 kb on + strand at 508.190 kb on - strand at 508.198 kb on - strand at 508.229 kb on + strand at 508.362 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 505,343 + -1.8 505,435 - -2.4 505,507 + SGL_RS04260 0.19 -2.2 505,507 + SGL_RS04260 0.19 -4.0 505,515 - SGL_RS04260 0.20 -2.6 505,571 - SGL_RS04260 0.27 -0.4 505,665 + SGL_RS04260 0.38 -4.1 505,665 + SGL_RS04260 0.38 -3.1 505,665 + SGL_RS04260 0.38 -1.8 505,680 + SGL_RS04260 0.40 -3.1 505,698 + SGL_RS04260 0.43 -3.7 505,782 - SGL_RS04260 0.53 -3.5 505,786 + SGL_RS04260 0.53 -0.9 505,809 - SGL_RS04260 0.56 -4.3 505,886 - SGL_RS04260 0.66 -3.9 506,093 + -3.9 506,223 + -0.1 506,311 - +0.2 506,410 - +0.1 506,456 - SGL_RS04265 0.11 -0.8 506,458 + SGL_RS04265 0.12 +0.2 506,499 - SGL_RS04265 0.14 +0.4 506,815 + SGL_RS04265 0.32 -0.3 506,896 - SGL_RS04265 0.36 -2.0 506,910 + SGL_RS04265 0.37 +0.4 507,136 - SGL_RS04265 0.50 +0.1 507,276 + SGL_RS04265 0.58 -1.3 507,302 - SGL_RS04265 0.59 -2.1 507,399 + SGL_RS04265 0.65 +1.0 507,685 + SGL_RS04265 0.81 +0.2 507,693 - SGL_RS04265 0.81 +0.7 507,699 + SGL_RS04265 0.81 -0.3 507,715 + SGL_RS04265 0.82 -1.7 507,963 - -2.0 508,126 - +0.9 508,136 - +0.1 508,182 + +1.0 508,190 - -0.8 508,198 - +0.7 508,229 + +0.4 508,362 + -1.8
Or see this region's nucleotide sequence