Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03820 and SGL_RS03825 are separated by 117 nucleotides SGL_RS03825 and SGL_RS03830 are separated by 130 nucleotides
SGL_RS03820: SGL_RS03820 - universal stress protein, at 403,552 to 404,427
_RS03820
SGL_RS03825: SGL_RS03825 - ExeM/NucH family extracellular endonuclease, at 404,545 to 410,184
_RS03825
SGL_RS03830: SGL_RS03830 - choice-of-anchor I family protein, at 410,315 to 414,544
_RS03830
Position (kb) 404
405
406
407
408
409
410
411 Strain fitness (log2 ratio) -2
-1
0
1 at 403.689 kb on - strand, within SGL_RS03820 at 403.758 kb on - strand, within SGL_RS03820 at 403.778 kb on + strand, within SGL_RS03820 at 403.785 kb on + strand, within SGL_RS03820 at 403.786 kb on - strand, within SGL_RS03820 at 403.809 kb on - strand, within SGL_RS03820 at 403.906 kb on + strand, within SGL_RS03820 at 403.955 kb on + strand, within SGL_RS03820 at 403.976 kb on - strand, within SGL_RS03820 at 403.978 kb on - strand, within SGL_RS03820 at 404.143 kb on + strand, within SGL_RS03820 at 404.153 kb on + strand, within SGL_RS03820 at 404.153 kb on + strand, within SGL_RS03820 at 404.161 kb on - strand, within SGL_RS03820 at 404.267 kb on - strand, within SGL_RS03820 at 404.274 kb on - strand, within SGL_RS03820 at 404.362 kb on + strand at 404.431 kb on + strand at 404.555 kb on + strand at 404.653 kb on - strand at 404.715 kb on - strand at 404.796 kb on - strand at 404.796 kb on - strand at 404.870 kb on - strand at 404.875 kb on - strand at 405.222 kb on + strand, within SGL_RS03825 at 405.230 kb on - strand, within SGL_RS03825 at 405.230 kb on - strand, within SGL_RS03825 at 405.308 kb on + strand, within SGL_RS03825 at 405.399 kb on - strand, within SGL_RS03825 at 405.405 kb on - strand, within SGL_RS03825 at 405.418 kb on - strand, within SGL_RS03825 at 405.457 kb on + strand, within SGL_RS03825 at 405.475 kb on + strand, within SGL_RS03825 at 405.480 kb on + strand, within SGL_RS03825 at 405.616 kb on - strand, within SGL_RS03825 at 405.761 kb on + strand, within SGL_RS03825 at 405.769 kb on - strand, within SGL_RS03825 at 405.771 kb on + strand, within SGL_RS03825 at 405.773 kb on + strand, within SGL_RS03825 at 405.795 kb on - strand, within SGL_RS03825 at 405.797 kb on + strand, within SGL_RS03825 at 405.808 kb on + strand, within SGL_RS03825 at 406.031 kb on + strand, within SGL_RS03825 at 406.033 kb on + strand, within SGL_RS03825 at 406.033 kb on + strand, within SGL_RS03825 at 406.033 kb on + strand, within SGL_RS03825 at 406.041 kb on - strand, within SGL_RS03825 at 406.113 kb on - strand, within SGL_RS03825 at 406.163 kb on - strand, within SGL_RS03825 at 406.174 kb on + strand, within SGL_RS03825 at 406.253 kb on - strand, within SGL_RS03825 at 406.269 kb on + strand, within SGL_RS03825 at 406.275 kb on - strand, within SGL_RS03825 at 406.324 kb on - strand, within SGL_RS03825 at 406.460 kb on - strand, within SGL_RS03825 at 406.490 kb on - strand, within SGL_RS03825 at 406.496 kb on - strand, within SGL_RS03825 at 406.685 kb on + strand, within SGL_RS03825 at 406.693 kb on - strand, within SGL_RS03825 at 406.697 kb on + strand, within SGL_RS03825 at 406.829 kb on - strand, within SGL_RS03825 at 406.874 kb on - strand, within SGL_RS03825 at 406.944 kb on + strand, within SGL_RS03825 at 406.997 kb on - strand, within SGL_RS03825 at 407.002 kb on - strand, within SGL_RS03825 at 407.078 kb on + strand, within SGL_RS03825 at 407.294 kb on - strand, within SGL_RS03825 at 407.353 kb on + strand, within SGL_RS03825 at 407.378 kb on + strand, within SGL_RS03825 at 407.410 kb on + strand, within SGL_RS03825 at 407.545 kb on + strand, within SGL_RS03825 at 407.605 kb on + strand, within SGL_RS03825 at 407.615 kb on + strand, within SGL_RS03825 at 407.615 kb on + strand, within SGL_RS03825 at 407.651 kb on + strand, within SGL_RS03825 at 407.782 kb on - strand, within SGL_RS03825 at 407.828 kb on - strand, within SGL_RS03825 at 407.828 kb on - strand, within SGL_RS03825 at 408.023 kb on + strand, within SGL_RS03825 at 408.023 kb on + strand, within SGL_RS03825 at 408.023 kb on + strand, within SGL_RS03825 at 408.033 kb on - strand, within SGL_RS03825 at 408.096 kb on + strand, within SGL_RS03825 at 408.097 kb on + strand, within SGL_RS03825 at 408.116 kb on - strand, within SGL_RS03825 at 408.201 kb on - strand, within SGL_RS03825 at 408.293 kb on + strand, within SGL_RS03825 at 408.429 kb on + strand, within SGL_RS03825 at 408.429 kb on - strand, within SGL_RS03825 at 408.479 kb on + strand, within SGL_RS03825 at 408.489 kb on + strand, within SGL_RS03825 at 408.489 kb on + strand, within SGL_RS03825 at 408.529 kb on - strand, within SGL_RS03825 at 408.539 kb on - strand, within SGL_RS03825 at 408.591 kb on + strand, within SGL_RS03825 at 408.591 kb on - strand, within SGL_RS03825 at 408.593 kb on + strand, within SGL_RS03825 at 408.601 kb on - strand, within SGL_RS03825 at 408.790 kb on + strand, within SGL_RS03825 at 408.798 kb on - strand, within SGL_RS03825 at 408.874 kb on - strand, within SGL_RS03825 at 408.874 kb on - strand, within SGL_RS03825 at 408.884 kb on - strand, within SGL_RS03825 at 408.884 kb on - strand, within SGL_RS03825 at 408.885 kb on + strand, within SGL_RS03825 at 408.894 kb on - strand, within SGL_RS03825 at 408.894 kb on - strand, within SGL_RS03825 at 409.069 kb on + strand, within SGL_RS03825 at 409.102 kb on - strand, within SGL_RS03825 at 409.323 kb on - strand, within SGL_RS03825 at 409.323 kb on - strand, within SGL_RS03825 at 409.347 kb on - strand, within SGL_RS03825 at 409.419 kb on + strand, within SGL_RS03825 at 409.421 kb on + strand, within SGL_RS03825 at 409.507 kb on - strand, within SGL_RS03825 at 409.591 kb on - strand, within SGL_RS03825 at 409.609 kb on + strand, within SGL_RS03825 at 409.692 kb on + strand at 409.700 kb on + strand at 409.700 kb on - strand at 409.740 kb on - strand at 409.763 kb on - strand at 409.841 kb on - strand at 410.034 kb on - strand at 410.039 kb on - strand at 410.039 kb on - strand at 410.117 kb on - strand at 410.339 kb on + strand at 410.342 kb on - strand at 410.344 kb on + strand at 410.349 kb on + strand at 410.557 kb on + strand at 410.561 kb on - strand at 410.973 kb on + strand, within SGL_RS03830 at 411.083 kb on - strand, within SGL_RS03830 at 411.094 kb on - strand, within SGL_RS03830
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 403,689 - SGL_RS03820 0.16 +0.3 403,758 - SGL_RS03820 0.24 -0.7 403,778 + SGL_RS03820 0.26 -1.7 403,785 + SGL_RS03820 0.27 -1.2 403,786 - SGL_RS03820 0.27 -0.2 403,809 - SGL_RS03820 0.29 -0.2 403,906 + SGL_RS03820 0.40 -2.2 403,955 + SGL_RS03820 0.46 -1.9 403,976 - SGL_RS03820 0.48 -0.1 403,978 - SGL_RS03820 0.49 +0.7 404,143 + SGL_RS03820 0.67 -0.7 404,153 + SGL_RS03820 0.69 +0.8 404,153 + SGL_RS03820 0.69 +0.3 404,161 - SGL_RS03820 0.70 -0.3 404,267 - SGL_RS03820 0.82 -1.3 404,274 - SGL_RS03820 0.82 +0.1 404,362 + +0.9 404,431 + +0.4 404,555 + +1.2 404,653 - -0.6 404,715 - -1.1 404,796 - -0.2 404,796 - -0.3 404,870 - -1.2 404,875 - -0.1 405,222 + SGL_RS03825 0.12 -0.3 405,230 - SGL_RS03825 0.12 +1.0 405,230 - SGL_RS03825 0.12 +0.6 405,308 + SGL_RS03825 0.14 +0.2 405,399 - SGL_RS03825 0.15 +0.6 405,405 - SGL_RS03825 0.15 +0.6 405,418 - SGL_RS03825 0.15 -1.2 405,457 + SGL_RS03825 0.16 -0.8 405,475 + SGL_RS03825 0.16 -1.8 405,480 + SGL_RS03825 0.17 +0.3 405,616 - SGL_RS03825 0.19 +0.4 405,761 + SGL_RS03825 0.22 +0.7 405,769 - SGL_RS03825 0.22 +0.9 405,771 + SGL_RS03825 0.22 -0.5 405,773 + SGL_RS03825 0.22 -1.1 405,795 - SGL_RS03825 0.22 -0.5 405,797 + SGL_RS03825 0.22 -1.4 405,808 + SGL_RS03825 0.22 -0.1 406,031 + SGL_RS03825 0.26 -0.1 406,033 + SGL_RS03825 0.26 +0.1 406,033 + SGL_RS03825 0.26 -0.3 406,033 + SGL_RS03825 0.26 +0.6 406,041 - SGL_RS03825 0.27 -1.7 406,113 - SGL_RS03825 0.28 -0.0 406,163 - SGL_RS03825 0.29 -0.5 406,174 + SGL_RS03825 0.29 +0.4 406,253 - SGL_RS03825 0.30 -0.4 406,269 + SGL_RS03825 0.31 -1.2 406,275 - SGL_RS03825 0.31 -0.8 406,324 - SGL_RS03825 0.32 -0.6 406,460 - SGL_RS03825 0.34 -0.2 406,490 - SGL_RS03825 0.34 +0.4 406,496 - SGL_RS03825 0.35 -2.0 406,685 + SGL_RS03825 0.38 +0.5 406,693 - SGL_RS03825 0.38 -1.5 406,697 + SGL_RS03825 0.38 -1.6 406,829 - SGL_RS03825 0.40 -1.1 406,874 - SGL_RS03825 0.41 +1.6 406,944 + SGL_RS03825 0.43 +0.4 406,997 - SGL_RS03825 0.43 -0.1 407,002 - SGL_RS03825 0.44 -0.1 407,078 + SGL_RS03825 0.45 -0.5 407,294 - SGL_RS03825 0.49 +1.4 407,353 + SGL_RS03825 0.50 +0.7 407,378 + SGL_RS03825 0.50 +1.0 407,410 + SGL_RS03825 0.51 -0.7 407,545 + SGL_RS03825 0.53 -0.4 407,605 + SGL_RS03825 0.54 +0.6 407,615 + SGL_RS03825 0.54 -0.4 407,615 + SGL_RS03825 0.54 -0.8 407,651 + SGL_RS03825 0.55 +1.2 407,782 - SGL_RS03825 0.57 -0.1 407,828 - SGL_RS03825 0.58 -1.9 407,828 - SGL_RS03825 0.58 -0.4 408,023 + SGL_RS03825 0.62 -1.0 408,023 + SGL_RS03825 0.62 -1.2 408,023 + SGL_RS03825 0.62 -0.6 408,033 - SGL_RS03825 0.62 -1.1 408,096 + SGL_RS03825 0.63 -0.8 408,097 + SGL_RS03825 0.63 -1.6 408,116 - SGL_RS03825 0.63 -1.7 408,201 - SGL_RS03825 0.65 -0.9 408,293 + SGL_RS03825 0.66 -1.4 408,429 + SGL_RS03825 0.69 -1.7 408,429 - SGL_RS03825 0.69 +0.4 408,479 + SGL_RS03825 0.70 +0.2 408,489 + SGL_RS03825 0.70 -0.7 408,489 + SGL_RS03825 0.70 +0.3 408,529 - SGL_RS03825 0.71 -1.0 408,539 - SGL_RS03825 0.71 +0.2 408,591 + SGL_RS03825 0.72 -0.3 408,591 - SGL_RS03825 0.72 -0.9 408,593 + SGL_RS03825 0.72 -1.4 408,601 - SGL_RS03825 0.72 -0.8 408,790 + SGL_RS03825 0.75 +0.1 408,798 - SGL_RS03825 0.75 -2.5 408,874 - SGL_RS03825 0.77 +0.6 408,874 - SGL_RS03825 0.77 +0.7 408,884 - SGL_RS03825 0.77 -0.9 408,884 - SGL_RS03825 0.77 +0.9 408,885 + SGL_RS03825 0.77 -0.4 408,894 - SGL_RS03825 0.77 -0.5 408,894 - SGL_RS03825 0.77 +0.3 409,069 + SGL_RS03825 0.80 -0.5 409,102 - SGL_RS03825 0.81 -0.6 409,323 - SGL_RS03825 0.85 -0.1 409,323 - SGL_RS03825 0.85 -0.1 409,347 - SGL_RS03825 0.85 -2.6 409,419 + SGL_RS03825 0.86 -0.4 409,421 + SGL_RS03825 0.86 -0.6 409,507 - SGL_RS03825 0.88 +0.5 409,591 - SGL_RS03825 0.89 -1.2 409,609 + SGL_RS03825 0.90 -0.9 409,692 + +0.4 409,700 + -0.1 409,700 - -1.6 409,740 - -0.3 409,763 - -1.4 409,841 - +0.8 410,034 - -0.4 410,039 - -0.2 410,039 - +0.8 410,117 - -0.3 410,339 + -1.6 410,342 - -1.4 410,344 + +0.6 410,349 + -1.9 410,557 + +0.4 410,561 - -1.9 410,973 + SGL_RS03830 0.16 -0.9 411,083 - SGL_RS03830 0.18 -1.8 411,094 - SGL_RS03830 0.18 -1.3
Or see this region's nucleotide sequence