Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS18670 and SGL_RS03685 are separated by 116 nucleotides SGL_RS03685 and SGL_RS03690 are separated by 1 nucleotides
SGL_RS18670: SGL_RS18670 - IS630-like element ISTcSa family transposase, at 379,065 to 379,913
_RS18670
SGL_RS03685: SGL_RS03685 - glycosyltransferase, at 380,030 to 381,175
_RS03685
SGL_RS03690: SGL_RS03690 - glycosyltransferase, at 381,177 to 382,337
_RS03690
Position (kb) 380
381
382 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 379.955 kb on + strand at 380.053 kb on + strand at 380.344 kb on - strand, within SGL_RS03685 at 380.375 kb on - strand, within SGL_RS03685 at 380.389 kb on + strand, within SGL_RS03685 at 380.402 kb on - strand, within SGL_RS03685 at 380.486 kb on - strand, within SGL_RS03685 at 380.674 kb on - strand, within SGL_RS03685 at 380.729 kb on - strand, within SGL_RS03685 at 380.869 kb on - strand, within SGL_RS03685 at 380.920 kb on - strand, within SGL_RS03685 at 380.920 kb on - strand, within SGL_RS03685 at 380.971 kb on + strand, within SGL_RS03685 at 380.971 kb on + strand, within SGL_RS03685 at 380.998 kb on - strand, within SGL_RS03685 at 381.016 kb on - strand, within SGL_RS03685 at 381.301 kb on + strand, within SGL_RS03690 at 381.308 kb on + strand, within SGL_RS03690 at 381.309 kb on - strand, within SGL_RS03690 at 381.346 kb on - strand, within SGL_RS03690 at 381.423 kb on + strand, within SGL_RS03690 at 381.445 kb on + strand, within SGL_RS03690 at 381.453 kb on - strand, within SGL_RS03690 at 381.457 kb on + strand, within SGL_RS03690 at 381.458 kb on - strand, within SGL_RS03690 at 381.465 kb on - strand, within SGL_RS03690 at 381.465 kb on - strand, within SGL_RS03690 at 381.465 kb on - strand, within SGL_RS03690 at 381.465 kb on - strand, within SGL_RS03690 at 381.507 kb on + strand, within SGL_RS03690 at 381.539 kb on + strand, within SGL_RS03690 at 381.578 kb on - strand, within SGL_RS03690 at 381.591 kb on + strand, within SGL_RS03690 at 381.592 kb on + strand, within SGL_RS03690 at 381.592 kb on + strand, within SGL_RS03690 at 381.600 kb on - strand, within SGL_RS03690 at 381.661 kb on - strand, within SGL_RS03690 at 381.668 kb on - strand, within SGL_RS03690 at 381.777 kb on + strand, within SGL_RS03690 at 381.785 kb on - strand, within SGL_RS03690 at 381.867 kb on - strand, within SGL_RS03690 at 381.934 kb on - strand, within SGL_RS03690 at 381.953 kb on + strand, within SGL_RS03690 at 381.953 kb on + strand, within SGL_RS03690 at 381.994 kb on - strand, within SGL_RS03690 at 382.002 kb on + strand, within SGL_RS03690 at 382.089 kb on + strand, within SGL_RS03690 at 382.135 kb on + strand, within SGL_RS03690 at 382.140 kb on - strand, within SGL_RS03690 at 382.143 kb on - strand, within SGL_RS03690
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 379,955 + +1.4 380,053 + -3.6 380,344 - SGL_RS03685 0.27 -3.0 380,375 - SGL_RS03685 0.30 -4.7 380,389 + SGL_RS03685 0.31 -4.2 380,402 - SGL_RS03685 0.32 -1.7 380,486 - SGL_RS03685 0.40 -3.9 380,674 - SGL_RS03685 0.56 -4.2 380,729 - SGL_RS03685 0.61 -1.4 380,869 - SGL_RS03685 0.73 -3.7 380,920 - SGL_RS03685 0.78 -4.4 380,920 - SGL_RS03685 0.78 -0.9 380,971 + SGL_RS03685 0.82 -4.9 380,971 + SGL_RS03685 0.82 -4.8 380,998 - SGL_RS03685 0.84 -4.3 381,016 - SGL_RS03685 0.86 -2.3 381,301 + SGL_RS03690 0.11 -4.1 381,308 + SGL_RS03690 0.11 -2.9 381,309 - SGL_RS03690 0.11 -4.7 381,346 - SGL_RS03690 0.15 -1.5 381,423 + SGL_RS03690 0.21 -5.1 381,445 + SGL_RS03690 0.23 -3.4 381,453 - SGL_RS03690 0.24 -3.7 381,457 + SGL_RS03690 0.24 -5.2 381,458 - SGL_RS03690 0.24 -3.6 381,465 - SGL_RS03690 0.25 -2.4 381,465 - SGL_RS03690 0.25 -2.9 381,465 - SGL_RS03690 0.25 -3.5 381,465 - SGL_RS03690 0.25 -3.4 381,507 + SGL_RS03690 0.28 -4.4 381,539 + SGL_RS03690 0.31 -4.3 381,578 - SGL_RS03690 0.35 -2.6 381,591 + SGL_RS03690 0.36 -4.0 381,592 + SGL_RS03690 0.36 -2.0 381,592 + SGL_RS03690 0.36 -3.7 381,600 - SGL_RS03690 0.36 +0.1 381,661 - SGL_RS03690 0.42 -0.7 381,668 - SGL_RS03690 0.42 -4.5 381,777 + SGL_RS03690 0.52 -3.8 381,785 - SGL_RS03690 0.52 -2.3 381,867 - SGL_RS03690 0.59 -1.0 381,934 - SGL_RS03690 0.65 -3.5 381,953 + SGL_RS03690 0.67 -3.7 381,953 + SGL_RS03690 0.67 -2.4 381,994 - SGL_RS03690 0.70 -3.2 382,002 + SGL_RS03690 0.71 -3.2 382,089 + SGL_RS03690 0.79 -3.6 382,135 + SGL_RS03690 0.83 -3.3 382,140 - SGL_RS03690 0.83 -3.6 382,143 - SGL_RS03690 0.83 -3.9
Or see this region's nucleotide sequence