Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03275 and SGL_RS03280 are separated by 226 nucleotides SGL_RS03280 and SGL_RS03285 are separated by 12 nucleotides SGL_RS03285 and SGL_RS03290 overlap by 4 nucleotides
SGL_RS03275: SGL_RS03275 - UDP-glucose/GDP-mannose dehydrogenase family protein, at 299,522 to 300,883
_RS03275
SGL_RS03280: SGL_RS03280 - FAD-dependent hydroxylase, at 301,110 to 302,354
_RS03280
SGL_RS03285: SGL_RS03285 - fluoride efflux transporter CrcB, at 302,367 to 302,789
_RS03285
SGL_RS03290: SGL_RS03290 - LapA family protein, at 302,786 to 303,190
_RS03290
Position (kb) 301
302
303 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 300.199 kb on + strand, within SGL_RS03275 at 300.281 kb on - strand, within SGL_RS03275 at 300.399 kb on - strand, within SGL_RS03275 at 300.407 kb on + strand, within SGL_RS03275 at 300.414 kb on - strand, within SGL_RS03275 at 300.581 kb on - strand, within SGL_RS03275 at 300.583 kb on + strand, within SGL_RS03275 at 300.710 kb on + strand, within SGL_RS03275 at 300.781 kb on - strand at 300.783 kb on + strand at 300.791 kb on - strand at 300.869 kb on - strand at 300.893 kb on - strand at 300.941 kb on - strand at 300.963 kb on - strand at 301.045 kb on + strand at 301.115 kb on - strand at 302.354 kb on + strand at 302.410 kb on - strand, within SGL_RS03285 at 302.440 kb on - strand, within SGL_RS03285 at 302.459 kb on - strand, within SGL_RS03285 at 302.489 kb on + strand, within SGL_RS03285 at 302.497 kb on - strand, within SGL_RS03285 at 302.511 kb on - strand, within SGL_RS03285 at 302.550 kb on + strand, within SGL_RS03285 at 302.686 kb on - strand, within SGL_RS03285 at 302.973 kb on - strand, within SGL_RS03290 at 303.064 kb on - strand, within SGL_RS03290 at 303.142 kb on + strand, within SGL_RS03290 at 303.344 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 300,199 + SGL_RS03275 0.50 -2.1 300,281 - SGL_RS03275 0.56 -0.9 300,399 - SGL_RS03275 0.64 -2.8 300,407 + SGL_RS03275 0.65 -2.6 300,414 - SGL_RS03275 0.65 -2.9 300,581 - SGL_RS03275 0.78 -0.4 300,583 + SGL_RS03275 0.78 +0.2 300,710 + SGL_RS03275 0.87 -0.8 300,781 - -3.7 300,783 + -3.4 300,791 - -2.6 300,869 - -1.8 300,893 - -0.0 300,941 - -0.2 300,963 - +0.2 301,045 + +7.6 301,115 - +0.9 302,354 + -0.3 302,410 - SGL_RS03285 0.10 +1.8 302,440 - SGL_RS03285 0.17 -0.5 302,459 - SGL_RS03285 0.22 -1.6 302,489 + SGL_RS03285 0.29 -0.7 302,497 - SGL_RS03285 0.31 -1.3 302,511 - SGL_RS03285 0.34 -0.5 302,550 + SGL_RS03285 0.43 +0.0 302,686 - SGL_RS03285 0.75 -0.7 302,973 - SGL_RS03290 0.46 -0.6 303,064 - SGL_RS03290 0.69 +0.6 303,142 + SGL_RS03290 0.88 -1.0 303,344 - +0.9
Or see this region's nucleotide sequence