Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03170 and SGL_RS03175 are separated by 151 nucleotides SGL_RS03175 and SGL_RS03180 overlap by 50 nucleotides SGL_RS03180 and SGL_RS03185 are separated by 39 nucleotides
SGL_RS03170: SGL_RS03170 - hypothetical protein, at 276,429 to 278,342
_RS03170
SGL_RS03175: SGL_RS03175 - hypothetical protein, at 278,494 to 279,561
_RS03175
SGL_RS03180: SGL_RS03180 - DUF3611 family protein, at 279,512 to 280,087
_RS03180
SGL_RS03185: SGL_RS03185 - biotin--[acetyl-CoA-carboxylase] ligase, at 280,127 to 280,951
_RS03185
Position (kb) 278
279
280 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 277.500 kb on - strand, within SGL_RS03170 at 277.505 kb on - strand, within SGL_RS03170 at 277.511 kb on - strand, within SGL_RS03170 at 277.615 kb on - strand, within SGL_RS03170 at 277.724 kb on + strand, within SGL_RS03170 at 277.870 kb on - strand, within SGL_RS03170 at 278.084 kb on + strand, within SGL_RS03170 at 278.187 kb on + strand at 278.195 kb on - strand at 278.195 kb on - strand at 278.235 kb on - strand at 278.283 kb on - strand at 278.284 kb on - strand at 278.319 kb on + strand at 278.497 kb on - strand at 278.643 kb on - strand, within SGL_RS03175 at 278.724 kb on - strand, within SGL_RS03175 at 278.781 kb on - strand, within SGL_RS03175 at 278.781 kb on - strand, within SGL_RS03175 at 278.905 kb on + strand, within SGL_RS03175 at 279.012 kb on - strand, within SGL_RS03175 at 279.013 kb on + strand, within SGL_RS03175 at 279.134 kb on - strand, within SGL_RS03175 at 279.282 kb on + strand, within SGL_RS03175 at 279.351 kb on - strand, within SGL_RS03175 at 279.392 kb on - strand, within SGL_RS03175 at 279.452 kb on + strand, within SGL_RS03175 at 279.489 kb on + strand at 279.690 kb on - strand, within SGL_RS03180 at 280.024 kb on + strand, within SGL_RS03180 at 280.029 kb on - strand, within SGL_RS03180 at 280.064 kb on - strand at 280.082 kb on + strand at 280.176 kb on - strand at 280.242 kb on + strand, within SGL_RS03185 at 280.350 kb on - strand, within SGL_RS03185 at 280.499 kb on - strand, within SGL_RS03185
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 277,500 - SGL_RS03170 0.56 -2.4 277,505 - SGL_RS03170 0.56 -2.6 277,511 - SGL_RS03170 0.57 -1.9 277,615 - SGL_RS03170 0.62 -0.6 277,724 + SGL_RS03170 0.68 -2.9 277,870 - SGL_RS03170 0.75 -3.7 278,084 + SGL_RS03170 0.86 -0.9 278,187 + -3.2 278,195 - -2.7 278,195 - -0.6 278,235 - -3.5 278,283 - +0.1 278,284 - -0.8 278,319 + -1.8 278,497 - +1.8 278,643 - SGL_RS03175 0.14 +2.3 278,724 - SGL_RS03175 0.22 +2.1 278,781 - SGL_RS03175 0.27 +2.2 278,781 - SGL_RS03175 0.27 +2.4 278,905 + SGL_RS03175 0.38 +0.3 279,012 - SGL_RS03175 0.49 +1.9 279,013 + SGL_RS03175 0.49 +1.3 279,134 - SGL_RS03175 0.60 -0.0 279,282 + SGL_RS03175 0.74 +2.4 279,351 - SGL_RS03175 0.80 +1.9 279,392 - SGL_RS03175 0.84 +2.0 279,452 + SGL_RS03175 0.90 +0.8 279,489 + +1.4 279,690 - SGL_RS03180 0.31 +0.9 280,024 + SGL_RS03180 0.89 +0.6 280,029 - SGL_RS03180 0.90 -0.7 280,064 - -0.5 280,082 + -0.2 280,176 - -3.3 280,242 + SGL_RS03185 0.14 +0.1 280,350 - SGL_RS03185 0.27 -0.4 280,499 - SGL_RS03185 0.45 +1.6
Or see this region's nucleotide sequence