Experiment: low light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS17100 and SGL_RS17105 are separated by 37 nucleotides SGL_RS17105 and SGL_RS17110 are separated by 87 nucleotides SGL_RS17110 and SGL_RS17115 are separated by 193 nucleotides
SGL_RS17100: SGL_RS17100 - SWIM zinc finger family protein, at 3,291,097 to 3,291,966
_RS17100
SGL_RS17105: SGL_RS17105 - tRNA-Leu, at 3,292,004 to 3,292,089
_RS17105
SGL_RS17110: SGL_RS17110 - hypothetical protein, at 3,292,177 to 3,292,884
_RS17110
SGL_RS17115: SGL_RS17115 - DUF3370 domain-containing protein, at 3,293,078 to 3,294,505
_RS17115
Position (kb)
3292
3293 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2
3 at 3291.326 kb on - strand, within SGL_RS17100 at 3291.367 kb on + strand, within SGL_RS17100 at 3291.393 kb on - strand, within SGL_RS17100 at 3291.398 kb on + strand, within SGL_RS17100 at 3291.621 kb on + strand, within SGL_RS17100 at 3291.621 kb on + strand, within SGL_RS17100 at 3291.634 kb on - strand, within SGL_RS17100 at 3291.650 kb on + strand, within SGL_RS17100 at 3291.665 kb on - strand, within SGL_RS17100 at 3291.665 kb on - strand, within SGL_RS17100 at 3291.822 kb on + strand, within SGL_RS17100 at 3292.278 kb on - strand, within SGL_RS17110 at 3292.325 kb on - strand, within SGL_RS17110 at 3292.387 kb on + strand, within SGL_RS17110 at 3292.587 kb on + strand, within SGL_RS17110 at 3292.595 kb on - strand, within SGL_RS17110 at 3292.596 kb on + strand, within SGL_RS17110 at 3292.616 kb on + strand, within SGL_RS17110 at 3292.789 kb on + strand, within SGL_RS17110 at 3292.970 kb on - strand at 3293.223 kb on + strand, within SGL_RS17115 at 3293.231 kb on - strand, within SGL_RS17115 at 3293.360 kb on - strand, within SGL_RS17115 at 3293.370 kb on + strand, within SGL_RS17115 at 3293.483 kb on - strand, within SGL_RS17115 at 3293.742 kb on - strand, within SGL_RS17115
Per-strain Table
Position Strand Gene LocusTag Fraction low light; bubbling remove 3,291,326 - SGL_RS17100 0.26 +0.5 3,291,367 + SGL_RS17100 0.31 +0.6 3,291,393 - SGL_RS17100 0.34 -0.3 3,291,398 + SGL_RS17100 0.35 +1.0 3,291,621 + SGL_RS17100 0.60 +0.6 3,291,621 + SGL_RS17100 0.60 +0.5 3,291,634 - SGL_RS17100 0.62 +0.2 3,291,650 + SGL_RS17100 0.64 +0.7 3,291,665 - SGL_RS17100 0.65 +0.6 3,291,665 - SGL_RS17100 0.65 -0.8 3,291,822 + SGL_RS17100 0.83 +0.0 3,292,278 - SGL_RS17110 0.14 -3.9 3,292,325 - SGL_RS17110 0.21 -1.6 3,292,387 + SGL_RS17110 0.30 -3.2 3,292,587 + SGL_RS17110 0.58 -5.6 3,292,595 - SGL_RS17110 0.59 -2.6 3,292,596 + SGL_RS17110 0.59 -6.1 3,292,616 + SGL_RS17110 0.62 -3.7 3,292,789 + SGL_RS17110 0.86 -5.4 3,292,970 - +1.5 3,293,223 + SGL_RS17115 0.10 +1.8 3,293,231 - SGL_RS17115 0.11 +3.4 3,293,360 - SGL_RS17115 0.20 +3.3 3,293,370 + SGL_RS17115 0.20 +2.6 3,293,483 - SGL_RS17115 0.28 +2.6 3,293,742 - SGL_RS17115 0.46 +2.1
Or see this region's nucleotide sequence