Experiment: low light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS16680 and SGL_RS16685 are separated by 101 nucleotides SGL_RS16685 and SGL_RS16690 are separated by 235 nucleotides SGL_RS16690 and SGL_RS16695 are separated by 9 nucleotides
SGL_RS16680: SGL_RS16680 - DUF4922 domain-containing protein, at 3,199,930 to 3,200,838
_RS16680
SGL_RS16685: SGL_RS16685 - hypothetical protein, at 3,200,940 to 3,201,452
_RS16685
SGL_RS16690: SGL_RS16690 - adenosine kinase, at 3,201,688 to 3,202,689
_RS16690
SGL_RS16695: SGL_RS16695 - magnesium/cobalt transporter CorA, at 3,202,699 to 3,203,862
_RS16695
Position (kb)
3201
3202
3203 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 3200.780 kb on + strand at 3200.780 kb on + strand at 3200.836 kb on - strand at 3201.009 kb on - strand, within SGL_RS16685 at 3201.020 kb on - strand, within SGL_RS16685 at 3201.066 kb on - strand, within SGL_RS16685 at 3201.241 kb on + strand, within SGL_RS16685 at 3201.311 kb on + strand, within SGL_RS16685 at 3201.689 kb on - strand at 3201.752 kb on + strand at 3201.849 kb on - strand, within SGL_RS16690 at 3201.849 kb on - strand, within SGL_RS16690 at 3201.886 kb on + strand, within SGL_RS16690 at 3201.914 kb on - strand, within SGL_RS16690 at 3202.436 kb on - strand, within SGL_RS16690 at 3202.495 kb on + strand, within SGL_RS16690 at 3202.553 kb on + strand, within SGL_RS16690 at 3202.561 kb on - strand, within SGL_RS16690 at 3202.633 kb on - strand at 3202.840 kb on + strand, within SGL_RS16695 at 3203.402 kb on + strand, within SGL_RS16695 at 3203.409 kb on + strand, within SGL_RS16695 at 3203.584 kb on + strand, within SGL_RS16695 at 3203.592 kb on - strand, within SGL_RS16695
Per-strain Table
Position Strand Gene LocusTag Fraction low light; bubbling remove 3,200,780 + -0.7 3,200,780 + -0.1 3,200,836 - -0.5 3,201,009 - SGL_RS16685 0.13 +0.3 3,201,020 - SGL_RS16685 0.16 +0.4 3,201,066 - SGL_RS16685 0.25 -0.4 3,201,241 + SGL_RS16685 0.59 -0.9 3,201,311 + SGL_RS16685 0.72 +0.1 3,201,689 - -5.3 3,201,752 + -5.6 3,201,849 - SGL_RS16690 0.16 -1.9 3,201,849 - SGL_RS16690 0.16 -5.6 3,201,886 + SGL_RS16690 0.20 -6.0 3,201,914 - SGL_RS16690 0.23 -3.6 3,202,436 - SGL_RS16690 0.75 -1.3 3,202,495 + SGL_RS16690 0.81 -2.5 3,202,553 + SGL_RS16690 0.86 -4.2 3,202,561 - SGL_RS16690 0.87 -2.6 3,202,633 - -6.0 3,202,840 + SGL_RS16695 0.12 -5.1 3,203,402 + SGL_RS16695 0.60 -4.6 3,203,409 + SGL_RS16695 0.61 -4.6 3,203,584 + SGL_RS16695 0.76 -4.2 3,203,592 - SGL_RS16695 0.77 -2.9
Or see this region's nucleotide sequence