Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS18090 and SGL_RS18095 are separated by 28 nucleotides SGL_RS18095 and SGL_RS18100 are separated by 121 nucleotides SGL_RS18100 and SGL_RS18105 are separated by 118 nucleotides
SGL_RS18090: SGL_RS18090 - glucose-1-phosphate adenylyltransferase, at 3,516,569 to 3,517,858
_RS18090
SGL_RS18095: SGL_RS18095 - TIGR03943 family protein, at 3,517,887 to 3,518,735
_RS18095
SGL_RS18100: SGL_RS18100 - SH3 domain-containing protein, at 3,518,857 to 3,519,312
_RS18100
SGL_RS18105: SGL_RS18105 - anhydro-N-acetylmuramic acid kinase, at 3,519,431 to 3,520,561
_RS18105
Position (kb) 3517
3518
3519 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 3517.374 kb on + strand, within SGL_RS18090 at 3517.955 kb on - strand at 3517.982 kb on - strand, within SGL_RS18095 at 3518.184 kb on + strand, within SGL_RS18095 at 3518.250 kb on - strand, within SGL_RS18095 at 3518.395 kb on + strand, within SGL_RS18095 at 3518.519 kb on + strand, within SGL_RS18095 at 3518.527 kb on - strand, within SGL_RS18095 at 3518.599 kb on + strand, within SGL_RS18095 at 3518.616 kb on + strand, within SGL_RS18095 at 3518.624 kb on - strand, within SGL_RS18095 at 3518.722 kb on - strand at 3519.056 kb on - strand, within SGL_RS18100 at 3519.236 kb on + strand, within SGL_RS18100 at 3519.467 kb on - strand at 3519.481 kb on - strand at 3519.508 kb on + strand at 3519.516 kb on - strand at 3519.573 kb on + strand, within SGL_RS18105 at 3519.689 kb on + strand, within SGL_RS18105 at 3519.697 kb on - strand, within SGL_RS18105 at 3519.711 kb on - strand, within SGL_RS18105 at 3519.720 kb on + strand, within SGL_RS18105
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 3,517,374 + SGL_RS18090 0.62 -0.1 3,517,955 - -1.8 3,517,982 - SGL_RS18095 0.11 -3.2 3,518,184 + SGL_RS18095 0.35 -2.9 3,518,250 - SGL_RS18095 0.43 -2.8 3,518,395 + SGL_RS18095 0.60 +0.3 3,518,519 + SGL_RS18095 0.74 -2.0 3,518,527 - SGL_RS18095 0.75 -2.6 3,518,599 + SGL_RS18095 0.84 -1.0 3,518,616 + SGL_RS18095 0.86 -2.9 3,518,624 - SGL_RS18095 0.87 -2.2 3,518,722 - -1.4 3,519,056 - SGL_RS18100 0.44 -1.9 3,519,236 + SGL_RS18100 0.83 -2.3 3,519,467 - +0.3 3,519,481 - +1.6 3,519,508 + +1.8 3,519,516 - +0.3 3,519,573 + SGL_RS18105 0.13 +0.2 3,519,689 + SGL_RS18105 0.23 -0.8 3,519,697 - SGL_RS18105 0.24 +1.6 3,519,711 - SGL_RS18105 0.25 -0.2 3,519,720 + SGL_RS18105 0.26 +0.7
Or see this region's nucleotide sequence