Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS16280 and SGL_RS16290 are separated by 655 nucleotides SGL_RS16290 and SGL_RS16295 are separated by 182 nucleotides
SGL_RS16280: SGL_RS16280 - L,D-transpeptidase, at 3,103,070 to 3,103,486
_RS16280
SGL_RS16290: SGL_RS16290 - DNA polymerase I, at 3,104,142 to 3,107,102
_RS16290
SGL_RS16295: SGL_RS16295 - hypothetical protein, at 3,107,285 to 3,108,493
_RS16295
Position (kb)
3104
3105
3106
3107
3108 Strain fitness (log2 ratio)
-1
0
1
2 at 3103.194 kb on + strand, within SGL_RS16280 at 3103.273 kb on - strand, within SGL_RS16280 at 3103.323 kb on + strand, within SGL_RS16280 at 3103.380 kb on + strand, within SGL_RS16280 at 3103.511 kb on - strand at 3103.946 kb on - strand at 3104.124 kb on - strand at 3106.611 kb on + strand, within SGL_RS16290 at 3106.794 kb on - strand, within SGL_RS16290 at 3107.434 kb on - strand, within SGL_RS16295 at 3107.493 kb on - strand, within SGL_RS16295 at 3107.563 kb on + strand, within SGL_RS16295 at 3107.595 kb on - strand, within SGL_RS16295 at 3107.598 kb on + strand, within SGL_RS16295 at 3107.609 kb on + strand, within SGL_RS16295 at 3107.617 kb on - strand, within SGL_RS16295 at 3107.617 kb on - strand, within SGL_RS16295 at 3107.631 kb on - strand, within SGL_RS16295 at 3107.651 kb on - strand, within SGL_RS16295 at 3107.687 kb on + strand, within SGL_RS16295 at 3107.721 kb on + strand, within SGL_RS16295 at 3107.737 kb on + strand, within SGL_RS16295 at 3107.755 kb on - strand, within SGL_RS16295 at 3107.759 kb on + strand, within SGL_RS16295 at 3107.760 kb on - strand, within SGL_RS16295 at 3107.787 kb on - strand, within SGL_RS16295 at 3107.832 kb on + strand, within SGL_RS16295 at 3108.018 kb on + strand, within SGL_RS16295 at 3108.026 kb on - strand, within SGL_RS16295 at 3108.028 kb on + strand, within SGL_RS16295 at 3108.030 kb on + strand, within SGL_RS16295 at 3108.038 kb on - strand, within SGL_RS16295 at 3108.045 kb on - strand, within SGL_RS16295 at 3108.050 kb on - strand, within SGL_RS16295
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 3,103,194 + SGL_RS16280 0.30 +1.1 3,103,273 - SGL_RS16280 0.49 +2.2 3,103,323 + SGL_RS16280 0.61 +1.4 3,103,380 + SGL_RS16280 0.74 +0.7 3,103,511 - +1.2 3,103,946 - -0.3 3,104,124 - -0.4 3,106,611 + SGL_RS16290 0.83 +0.9 3,106,794 - SGL_RS16290 0.90 +1.6 3,107,434 - SGL_RS16295 0.12 -1.0 3,107,493 - SGL_RS16295 0.17 +0.2 3,107,563 + SGL_RS16295 0.23 +0.1 3,107,595 - SGL_RS16295 0.26 +0.5 3,107,598 + SGL_RS16295 0.26 +1.0 3,107,609 + SGL_RS16295 0.27 -1.0 3,107,617 - SGL_RS16295 0.27 +0.9 3,107,617 - SGL_RS16295 0.27 +0.4 3,107,631 - SGL_RS16295 0.29 -1.4 3,107,651 - SGL_RS16295 0.30 -1.7 3,107,687 + SGL_RS16295 0.33 +1.2 3,107,721 + SGL_RS16295 0.36 -0.1 3,107,737 + SGL_RS16295 0.37 +0.3 3,107,755 - SGL_RS16295 0.39 +0.0 3,107,759 + SGL_RS16295 0.39 +0.7 3,107,760 - SGL_RS16295 0.39 +1.4 3,107,787 - SGL_RS16295 0.42 -0.8 3,107,832 + SGL_RS16295 0.45 -0.3 3,108,018 + SGL_RS16295 0.61 -0.0 3,108,026 - SGL_RS16295 0.61 -1.3 3,108,028 + SGL_RS16295 0.61 -1.3 3,108,030 + SGL_RS16295 0.62 +0.0 3,108,038 - SGL_RS16295 0.62 +0.8 3,108,045 - SGL_RS16295 0.63 +1.0 3,108,050 - SGL_RS16295 0.63 -0.1
Or see this region's nucleotide sequence