Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11685 and SGL_RS11690 are separated by 25 nucleotides SGL_RS11690 and SGL_RS11695 are separated by 764 nucleotides
SGL_RS11685: SGL_RS11685 - diflavin flavoprotein, at 2,076,547 to 2,078,340
_RS11685
SGL_RS11690: SGL_RS11690 - DNA repair protein RecN, at 2,078,366 to 2,080,120
_RS11690
SGL_RS11695: SGL_RS11695 - hypothetical protein, at 2,080,885 to 2,082,720
_RS11695
Position (kb)
2078
2079
2080
2081 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2077.404 kb on - strand, within SGL_RS11685 at 2077.452 kb on + strand, within SGL_RS11685 at 2077.502 kb on + strand, within SGL_RS11685 at 2077.602 kb on - strand, within SGL_RS11685 at 2077.639 kb on - strand, within SGL_RS11685 at 2077.662 kb on - strand, within SGL_RS11685 at 2077.727 kb on + strand, within SGL_RS11685 at 2077.747 kb on + strand, within SGL_RS11685 at 2077.779 kb on + strand, within SGL_RS11685 at 2077.787 kb on + strand, within SGL_RS11685 at 2077.794 kb on - strand, within SGL_RS11685 at 2077.820 kb on - strand, within SGL_RS11685 at 2077.839 kb on - strand, within SGL_RS11685 at 2077.949 kb on - strand, within SGL_RS11685 at 2078.009 kb on + strand, within SGL_RS11685 at 2078.044 kb on + strand, within SGL_RS11685 at 2078.044 kb on + strand, within SGL_RS11685 at 2078.124 kb on + strand, within SGL_RS11685 at 2078.224 kb on + strand at 2078.245 kb on + strand at 2078.363 kb on + strand at 2078.494 kb on + strand at 2078.508 kb on - strand at 2078.517 kb on - strand at 2078.549 kb on - strand, within SGL_RS11690 at 2078.598 kb on + strand, within SGL_RS11690 at 2078.604 kb on + strand, within SGL_RS11690 at 2078.647 kb on - strand, within SGL_RS11690 at 2078.777 kb on + strand, within SGL_RS11690 at 2078.844 kb on + strand, within SGL_RS11690 at 2079.047 kb on - strand, within SGL_RS11690 at 2079.064 kb on - strand, within SGL_RS11690 at 2079.239 kb on + strand, within SGL_RS11690 at 2079.303 kb on + strand, within SGL_RS11690 at 2079.510 kb on - strand, within SGL_RS11690 at 2080.054 kb on - strand at 2080.290 kb on - strand at 2080.434 kb on + strand at 2080.456 kb on + strand at 2080.652 kb on + strand at 2080.737 kb on + strand at 2080.921 kb on + strand at 2081.065 kb on + strand at 2081.085 kb on - strand, within SGL_RS11695
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 2,077,404 - SGL_RS11685 0.48 +0.3 2,077,452 + SGL_RS11685 0.50 +1.4 2,077,502 + SGL_RS11685 0.53 +0.4 2,077,602 - SGL_RS11685 0.59 -1.2 2,077,639 - SGL_RS11685 0.61 -0.3 2,077,662 - SGL_RS11685 0.62 +0.1 2,077,727 + SGL_RS11685 0.66 -0.9 2,077,747 + SGL_RS11685 0.67 +0.9 2,077,779 + SGL_RS11685 0.69 -0.4 2,077,787 + SGL_RS11685 0.69 +0.8 2,077,794 - SGL_RS11685 0.70 +1.1 2,077,820 - SGL_RS11685 0.71 +0.2 2,077,839 - SGL_RS11685 0.72 -1.3 2,077,949 - SGL_RS11685 0.78 -0.6 2,078,009 + SGL_RS11685 0.81 +0.6 2,078,044 + SGL_RS11685 0.83 +1.0 2,078,044 + SGL_RS11685 0.83 +0.5 2,078,124 + SGL_RS11685 0.88 -0.2 2,078,224 + +1.3 2,078,245 + +0.9 2,078,363 + -0.7 2,078,494 + +0.4 2,078,508 - -0.4 2,078,517 - -0.7 2,078,549 - SGL_RS11690 0.10 +1.4 2,078,598 + SGL_RS11690 0.13 -0.7 2,078,604 + SGL_RS11690 0.14 -0.9 2,078,647 - SGL_RS11690 0.16 -1.1 2,078,777 + SGL_RS11690 0.23 +0.3 2,078,844 + SGL_RS11690 0.27 -1.5 2,079,047 - SGL_RS11690 0.39 -0.5 2,079,064 - SGL_RS11690 0.40 +1.1 2,079,239 + SGL_RS11690 0.50 -0.3 2,079,303 + SGL_RS11690 0.53 +1.9 2,079,510 - SGL_RS11690 0.65 -1.8 2,080,054 - +0.9 2,080,290 - -0.0 2,080,434 + +0.9 2,080,456 + +1.1 2,080,652 + +0.5 2,080,737 + +0.1 2,080,921 + -1.2 2,081,065 + -0.8 2,081,085 - SGL_RS11695 0.11 -0.1
Or see this region's nucleotide sequence