Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11095 and SGL_RS11100 overlap by 20 nucleotides SGL_RS11100 and SGL_RS11105 are separated by 105 nucleotides SGL_RS11105 and SGL_RS11110 are separated by 149 nucleotides
SGL_RS11095: SGL_RS11095 - glycerol kinase GlpK, at 1,952,323 to 1,953,810
_RS11095
SGL_RS11100: SGL_RS11100 - RNA methyltransferase, at 1,953,791 to 1,954,615
_RS11100
SGL_RS11105: SGL_RS11105 - DUF760 domain-containing protein, at 1,954,721 to 1,955,071
_RS11105
SGL_RS11110: SGL_RS11110 - hydrogenase maturation nickel metallochaperone HypA, at 1,955,221 to 1,955,562
_RS11110
Position (kb)
1953
1954
1955 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1952.844 kb on - strand, within SGL_RS11095 at 1952.861 kb on - strand, within SGL_RS11095 at 1952.880 kb on - strand, within SGL_RS11095 at 1952.899 kb on - strand, within SGL_RS11095 at 1953.158 kb on + strand, within SGL_RS11095 at 1953.453 kb on + strand, within SGL_RS11095 at 1953.486 kb on - strand, within SGL_RS11095 at 1953.521 kb on + strand, within SGL_RS11095 at 1953.544 kb on - strand, within SGL_RS11095 at 1953.657 kb on + strand, within SGL_RS11095 at 1953.779 kb on + strand at 1953.871 kb on - strand at 1953.933 kb on + strand, within SGL_RS11100 at 1953.939 kb on - strand, within SGL_RS11100 at 1953.941 kb on - strand, within SGL_RS11100 at 1953.950 kb on + strand, within SGL_RS11100 at 1953.951 kb on + strand, within SGL_RS11100 at 1953.958 kb on - strand, within SGL_RS11100 at 1954.035 kb on + strand, within SGL_RS11100 at 1954.036 kb on - strand, within SGL_RS11100 at 1954.036 kb on - strand, within SGL_RS11100 at 1954.155 kb on + strand, within SGL_RS11100 at 1954.160 kb on + strand, within SGL_RS11100 at 1954.277 kb on - strand, within SGL_RS11100 at 1954.610 kb on + strand at 1954.748 kb on + strand at 1954.768 kb on - strand, within SGL_RS11105 at 1954.919 kb on + strand, within SGL_RS11105 at 1954.966 kb on - strand, within SGL_RS11105 at 1954.976 kb on - strand, within SGL_RS11105 at 1955.018 kb on - strand, within SGL_RS11105 at 1955.095 kb on - strand at 1955.122 kb on + strand at 1955.130 kb on - strand at 1955.130 kb on - strand at 1955.213 kb on - strand at 1955.320 kb on + strand, within SGL_RS11110 at 1955.327 kb on + strand, within SGL_RS11110 at 1955.369 kb on - strand, within SGL_RS11110 at 1955.515 kb on + strand, within SGL_RS11110
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 1,952,844 - SGL_RS11095 0.35 -0.1 1,952,861 - SGL_RS11095 0.36 +0.1 1,952,880 - SGL_RS11095 0.37 +0.3 1,952,899 - SGL_RS11095 0.39 -0.9 1,953,158 + SGL_RS11095 0.56 -1.0 1,953,453 + SGL_RS11095 0.76 -1.4 1,953,486 - SGL_RS11095 0.78 -0.7 1,953,521 + SGL_RS11095 0.81 -0.4 1,953,544 - SGL_RS11095 0.82 +0.2 1,953,657 + SGL_RS11095 0.90 -1.2 1,953,779 + -2.9 1,953,871 - +0.7 1,953,933 + SGL_RS11100 0.17 +1.2 1,953,939 - SGL_RS11100 0.18 +2.1 1,953,941 - SGL_RS11100 0.18 +1.1 1,953,950 + SGL_RS11100 0.19 +1.8 1,953,951 + SGL_RS11100 0.19 +2.1 1,953,958 - SGL_RS11100 0.20 +0.7 1,954,035 + SGL_RS11100 0.30 +2.2 1,954,036 - SGL_RS11100 0.30 +0.9 1,954,036 - SGL_RS11100 0.30 +2.0 1,954,155 + SGL_RS11100 0.44 +2.2 1,954,160 + SGL_RS11100 0.45 +0.3 1,954,277 - SGL_RS11100 0.59 +0.8 1,954,610 + +0.4 1,954,748 + -1.8 1,954,768 - SGL_RS11105 0.13 -0.3 1,954,919 + SGL_RS11105 0.56 -1.9 1,954,966 - SGL_RS11105 0.70 -0.2 1,954,976 - SGL_RS11105 0.73 +0.6 1,955,018 - SGL_RS11105 0.85 -0.9 1,955,095 - -0.2 1,955,122 + +0.9 1,955,130 - +0.1 1,955,130 - +0.2 1,955,213 - -1.3 1,955,320 + SGL_RS11110 0.29 -0.9 1,955,327 + SGL_RS11110 0.31 -0.8 1,955,369 - SGL_RS11110 0.43 -0.1 1,955,515 + SGL_RS11110 0.86 +0.5
Or see this region's nucleotide sequence